Salmo trutta (river trout): 115151521
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Entry
115151521 CDS
T08542
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115151521
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115151521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115151521
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115151521
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115151521
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115151521
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115151521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
115151521
NCBI-ProteinID:
XP_029551380
Ensembl:
ENSSTUG00000016777
LinkDB
All DBs
Position
17:complement(8069209..8106645)
Genome browser
AA seq
865 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMLLKRHVKEKATGAAGGAISRRRNGRVFLDLELNRDFNGDEYECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQESDSWDEEIQVSKHARSLRQTD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGAGGNGHALDHYKDTNFPLAVK
LDNITADGADIYSFDEEEAVLDPHISEHLQHFGIDMLQMQQNGTVNGHLNTDNTESVRPR
VSEWEVIQESGMKLKAVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIYD
YSPLDPTTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMREEYKHQPKGISPKMFKAMV
SKGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDVFRYLVEERVQCCQTQKVCYNQ
KVDYLMQLPAPIEAASNREELIAYEAKRREAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQINKFTFGIDWVPKKLDLSIDVPDFLDLSR
LRGTGLQAGEEELPDLTPPIVLPEDTRDDSMNSSDSPDIDESAAMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSFMEAGPSMASLGLAATPLDNQPPEESI
AILTSMGFPRRHTVQALKATNNNLERALDWIFTHPEEEEASDDLLDMSDIMEPNDNTFSN
ANTNSHSTLSPDQDASGPRIKDGPGRYELFAFISHMGASTMSGRYVCHIKKEGRWVIFND
HKVCLSERPPKDLGYIYFYRRLSSC
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatttaggagagctgcttgtcccttatatgcccaccatcagagttcccaga
acaggagacagggttttcaagagcgaatgtgccttttcctacgattctcccgagtctgag
ggaggcttgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaaccggacagagtgtttacatgctcctcaaacggcatgtcaaagagaaa
gccacaggtgccgcaggaggcgccatctccagaagaagaaatggcagagtgttcctagat
ttagaactaaaccgtgattttaacggagatgagtatgagtgtgaagacgaggccaagctc
gtcatatttccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgtgatgccgtgctcaacgctgcatcagcctacaaaaaacaggagtct
gactcctgggacgaggagatccaggtgtccaaacacgccaggagtctccgacagacggac
aacggagtgaggatcccacccagtggctggaaatgtcagaagtgtgagatgagagagaac
ctgtggctgaacctgacggacggagcggtgctctgtgggaagtggttcttcgatggtgct
ggaggaaacggacacgccctggaccactacaaagacaccaacttccccctggcagtcaaa
ctggacaacatcaccgcagatggagcagatatatattcatttgatgaagaagaagcagtc
ctggaccctcacatatccgaacacttgcaacactttggaatagacatgctacagatgcag
cagaatggaacagtaaacggccacctcaacactgacaacacagagagcgttcggcctcgg
gtcagcgagtgggaggtgatccaggagtcaggcatgaagctgaaggcggtgtatgggtca
ggttttacgggcattaagaacttgggcaacagctgctacctgggcaccaccatgcaggtc
cttttcagcatcccagagttccagagggcgtatgttggaaatctacagaggatctatgac
tactcacctcttgaccccaccacggatttcagcacacaaatggctaaactgggtcacgga
cttctctcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatg
agagaagaatacaagcaccagccgaagggcatctctcccaagatgttcaaagccatggtc
agcaagggccaccccgagttctcctccaacagacagcaagacgcacacgagttcttcctg
cacctcatcaacctggtcgagagaaacagtgctggctcagagaaccccagcgatgtcttc
cgctacctggtggaggagcgtgtgcagtgctgccagacgcagaaggtgtgctacaaccag
aaggtggactacctgatgcagctcccggcccccatagaggctgcctccaacagagaggag
ctgatagcgtatgaggccaagcgaagagaggcagaggaaaacatgagagcccctccagag
cctgtgagggcccggatccccttcacagcgtgcttgcaggccttcacagagccagagaac
gtccccgacttctggagctcggcactgcaggccaagtcagctggagtcaagacttcccgt
ttcgcctccttcccagagtatctggtagtgcagattaacaaattcacatttgggattgac
tgggttccaaagaaattagatctgtccatagacgtaccagacttcctggacctgtctcga
ctccggggcacagggcttcaggcaggagaggaagagcttcctgacctcaccccccccatc
gttctgcctgaagacaccagagatgactcaatgaactcctcagattccccagatatagac
gagtcggcggcaatgcagctggcggagatgggcttccctttggaggcctgtcggaaggcc
gtttactacacagggaacatgggccctgaaatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgagcccctggccctgccttccttcatggaggcaggcccctcc
atggccagcctgggcctggcagccacccccctggacaatcagcctccggaggagagcatc
gccatcctcacgtccatgggcttcccccgccgccacacggtccaggccctcaaagccacg
aacaacaacttggagagggctctggactggatcttcacccacccggaggaggaggaggcc
agcgacgaccttttggacatgtctgacatcatggagcccaacgacaacaccttctccaac
gcaaacacgaacagccactccacgctgtccccagaccaggatgcctcgggcccccggatc
aaagacggacccggacgttacgagctttttgctttcatcagccacatgggagcgtccacg
atgtctggtcgttatgtatgtcatatcaaaaaggaaggaagatgggtgatcttcaatgac
cataaagtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccgt
cggctgtccagctgctag
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