Salmo trutta (river trout): 115153505
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Entry
115153505 CDS
T08542
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115153505
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115153505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
115153505
NCBI-ProteinID:
XP_029554859
Ensembl:
ENSSTUG00000051158
LinkDB
All DBs
Position
18:complement(52181530..52916675)
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AA seq
377 aa
AA seq
DB search
MDTPSWAETKPGTGLCKQQGTIALFGNVVYSGLLNEHIWHFGVPVVTRLGNQEAPAPPEA
MAQPYPPAQYPPPPQNGIPAEYTAPHPPHPHPPADYTGQSAVAEHALTLYAATQTHSEQP
GNENNTPTLTATTVSQAEEVAQTEGSHQLHLQQCDSSEKQQPKRLHVSNIPFRFRDPDLR
QMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATAR
VMTNKKVSNPYTNGWKLNPMVGAVYGPELYAVAGFPYPSTGATVAYRGAHFRGRGRAVYN
TFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAATAATAYSDSYGRVYATAD
PYHHTIGPAATYSVGTM
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccagctgggcagaaaccaaaccaggaactggcttgtgtaagcagcaggga
accattgctctttttggcaacgtggtgtacagcggcctgctcaacgagcacatctggcat
ttcggggtacccgtcgtcaccagactgggtaaccaagaggcaccagccccccctgaagcg
atggcccagccctacccaccagcccagtacccccctcccccccagaacggtatcccagcg
gagtacaccgccccgcaccctcctcacccccacccgccggcagactacacggggcagagc
gcagtggctgagcacgccctaacgctgtacgcagccacacagacacacagcgaacaaccc
ggcaatgagaacaacacacccaccctcaccgccactacagtatcgcaggcagaagaggtt
gcgcaaacggagggctcccatcagctccacctgcagcagtgtgattcatcagagaagcag
cagcccaaacggttacatgtctccaacatccctttccgcttcagagacccagacctcagg
caaatgtttgggcaatttgggaagattttagacgtggaaataatttttaacgagcgaggt
tccaagggttttgggtttgtaacatttgaaacgagtgcagatgcggaccgtgcgcgggag
aaactaaatggtacaatcgtagagggacgcaaaatagaggtcaacaacgcaacagcaaga
gtaatgacaaacaaaaaggtgtcaaacccttacacaaacggctggaagctgaaccccatg
gtgggagctgtctatggtcctgaattgtatgcagtggcaggttttccctaccctagtaca
ggagcgacggtagcctatcgcggagctcatttcagaggaagggggcgggccgtctacaac
acattccgtgccgcgcccccacccccacccatccctgcctatggagctgttgtttaccag
gacggtttctatggtgcagaaatatacggaggttatgcagcatacagatacgcccagcca
gcagccacggctgcaaccgcatacagcgacagttacgggagagtctatgcaacagcagac
ccatatcaccacacgattggtcctgcggccacgtacagtgtgggtactatgtaa
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