Salmo trutta (river trout): 115154219
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Entry
115154219 CDS
T08542
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115154219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115154219
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115154219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
115154219
NCBI-ProteinID:
XP_029556081
Ensembl:
ENSSTUG00000017043
LinkDB
All DBs
Position
19:25553555..25562236
Genome browser
AA seq
1166 aa
AA seq
DB search
MSPREKRFIAFSSLVFCSIVIFCLVVYYIPTFFYIAFILGVCCVACIYHSGESLNARLGP
HPRHGLTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVFTDQRRSESAIYRQAAG
HSDSFLFSPRDILMGSYIGKAESPPSVVGRPRAGANSRVNPNAREQLREILARPNHAVYT
PNKRLSFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDGFRKKNILSPRNSPA
VHSPVTVKIARPDRNTTQSPFFDHLNSPGILGSPGLGAPADPCSRETVLSMLKESRKREV
DNEDDRSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPTQLVPKPGTLKRGLNTMMEEST
MKKSRTSSISSVSCGLTPSGILGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPGSSR
SQTPERASKKPREEDARSPSSASSTRSDKTLMDPAPTTEKLTPAPEVRVASDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECEKSAPAPVVTT
SYQPPVSSDPTPTLATLLASPLSISTSASVVAPIPVVNLDPVPSSIAAPVTTNHSANPLL
ESLKMMRNNALASAAAPTAAPAVSFVKALTPAPLVTSALQAETSLTAPQPTPTSSFQPAP
TSLSQPASTMSSAFIQVLSQVTKAPSSVPTLGGASLFGLANTLTAPSSSLATTEITSSNN
PLLASVFKPIFGPATPATSAPESTPAVPTFKPIFGSATATSAFGQPAATSAPSTASASAS
LLSGLTNSSTVAPAASLFTGVSSSTAPAPVPSVVPAAPPSVKSLFGNWSAPPAMTSATTI
APATGSTFQFGTTSTTAPAPTLSSTAAATTSNNGFLFGAMTTTSAATQLAPPATAQGGFT
FGQAAATQNSTTASFSGFGMATAATTTAAAPAIQSTFTFGKSSFDASAASAFPSATQAPA
AATAAANPFAFGSAGANPAPFAFGAAATTAASTFGTPTKLAFGASSTGFAFGNTAAAPAA
PAFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFSAAISGTQFGTPNLTT
QTPGFNFGAAASDKPAFGTSTPTFGQSTAAGPIPFGSPGTPVQGFSALAPSAFGSPSTPS
FSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcatagcgtttagctctctcgtgttttgttctatcgta
atattctgtctagttgtgtattatattccaacctttttttatatagcgttcattcttgga
gtttgttgcgttgcctgtatttatcacagcggagaatcactcaacgctaggttaggccct
catccacgccatggtctgactattccacccgtgctgcgacgctggttgccagagattgcg
aacggattacccacagcggggagagtcagaagtcgcaccgtcaagggtgatgttagggaa
ccgctagtatttaccgaccaaagacgttccgagagcgctatttatcggcaagccgcggga
cacagcgactcatttctgttcagtcctcgggatatactaatgggaagttacattgggaag
gcagaaagtcctccctcagttgttgggaggccgcgagccggtgcgaattcgcgtgttaac
ccaaacgcacgagagcaactgcgcgaaatattggcgcgacccaaccacgcggtttatact
ccgaacaaaaggctgtcattcgggagggagccccttggcatgatgggcaggttcaccata
actccccagcgccactaccccctccagcagaccggcacatcctctgtgggcatcctgccc
cctgcacagtgggacggcttcagaaagaagaacattctcagccctcgcaactccccggca
gtccacagtccagtcacagtgaagattgctaggccagatcgcaacaccactcaatcccct
ttctttgatcatttgaactccccgggaatccttggttctccaggcctgggggcccctgca
gacccctgctccagggagactgttctgagcatgctcaaagagagccgcaagagagaggtg
gacaatgaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgac
agcagtgggagtgctcactcggcatttgagccactgctgcccaatggagctcctacacag
ctggtgcccaagcctggtacgctgaagcgaggactgaacactatgatggaggagtcaacg
atgaagaagtcgcgcacctcctccatcagttctgtgagctgtggcctgacccccagcggc
atcctgggctcggtccgtaactccatccgcagctccctcagctcctcacaaggctttgct
cagcggaaaaaggcctccacccgcagcctctcccctctctccagccctgggtcgtcccgc
tcccagaccccagagagagcctctaaaaagcccagggaagaggatgctcgctcgcccagc
tctgcgtcctcgacgaggtctgacaagacgttgatggacccagcacccaccactgaaaaa
ctgactccagcccccgaggtccgtgtggcgtcagactctgcaggtagtgggaaacggaaa
cgcaagattccgctggtgtccagtcgtagaggagaccaaatctctctgcctccacctcct
gagctgggctacaccatcactgtgaaagacctggatcaggagaagaaagccgctctcagc
cagatcaacacagtcctcgaagagtgtgagaaatctgcgccagctccagtagtgaccaca
tcttatcaacctcctgtgtcaagcgaccccacacccaccctggccaccctgctggccagc
cctctttccatatcgacatctgccagtgtggtggctcctatccctgtggtcaacctggat
cctgtcccctcaagcattgccgcacccgtcaccaccaaccactcggccaaccccctcctg
gagtctcttaaaatgatgaggaacaacgccctcgccagtgctgctgcccccactgcagct
ccggctgtctcctttgtgaaagcattgactcctgcaccactggtgacttctgctctgcag
gcagagaccagcttgactgctcctcagcccacaccaacctcctcattccagcctgcccca
acctccctctcccagcctgccagcaccatgtcctctgctttcatccaggtgctgagccaa
gtcaccaaggcccccagcagtgtccccaccctgggtggagctagcttgtttggtctggcc
aacacactgacggccccttcctcctcactggccaccacagaaataaccagcagtaataat
cccctcctggcctctgtgttcaagcccatcttcgggcctgcgaccccagccacctcagcc
ccagagagcacacctgctgtcccaacttttaagcccatatttggaagtgccacagccacc
agtgcttttggacagccagccgctacctcagccccctccacagccagcgcatctgcttca
ttgctcagcgggctcaccaacagcagtacagtggctcctgctgcctccctgttcactgga
gtgtccagcagcaccgctcctgcccccgtcccctccgtagtgccagccgccccgccatct
gtcaagtctctgtttggaaactggagtgcgccgcctgcaatgacctctgccacgaccatt
gcccctgccacaggaagtactttccagttcggcaccacctccaccacagctcctgcaccc
accctcagctccaccgcagccgccaccactagcaacaacggctttttgtttggtgccatg
accaccacctctgccgccactcaactcgcccccccagccaccgcccaggggggatttacc
tttggccaggctgcagccacccaaaactctaccaccgcatccttcagtggctttggcatg
gccactgcagccactactactgctgcagcacctgcaatccagtccacgttcacgtttggg
aagtcgtcgttcgacgcctcagcagcatcagcgttccccagcgcgactcaggccccggct
gctgctactgcagcagctaatcctttcgcatttgggtcagctggggccaaccctgccccc
ttcgcttttggtgcagctgccactacggcagcttctacgtttgggacccccactaagctg
gcatttggagccagctccacaggttttgcatttggcaacaccgcggctgccccagcagcc
cctgcctttggctctgccactcagactgccggcacactcccagcctccgccccaaccttc
tcgtttggtggtgtatctgcacagcaggcccccgctacccctgtccagccaaccaccgga
ggattcaacttcagcgcagcaatttcaggcactcagtttggaacacccaatctcacaaca
cagacaccaggcttcaactttggggctgctgctagtgacaagccagccttcgggacgtct
acccctacttttggccagagcaccgctgcaggtcctatcccctttggaagcccaggaact
ccagtccaaggattcagtgctttggcaccctcagcattcggctctccatcaactccctcg
ttctccattggcgctggctccaaaacgtcaggggcacgccagaggctacaagcccgaagg
cagcaccccaggaagaaatag
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