KEGG   Salmo trutta (river trout): 115160556
Entry
115160556         CDS       T08542                                 
Name
(RefSeq) DNA repair protein REV1-like
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115160556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stru03400]
    115160556
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    115160556
SSDB
Motif
Pfam: IMS REV1_C IMS_C BRCT_2 POLH-Rev1_HhH BRCT UBM LIG3_BRCT IMS_HHH PTCB-BRCT HHH_5 Cdd1
Other DBs
NCBI-GeneID: 115160556
NCBI-ProteinID: XP_029566580
LinkDB
Position
24:38412691..38453339
AA seq 1590 aa
MAAKVSKLDEQLKLDAPREKPKDGACSSIFTGVAIYVNGYTEPSVDELRRLMNLHGGQFH
VYYSHSNTTHIIATNLPNSKIQELRDQKVVRPEWITDSIKAGHLLSYLQYQLYAKQKGLS
FPSVSVHQGQEPAGPLHGHLLPSHSLPLPSLNNHNPAPSLGQPLSRHHTPTSSHSHLHTD
NLHHQPNHYNPLASHLSPQPSHSLPSHLGPQPSNSPTSHLGPQPSNSPTSHLATSAPSPV
QAQFNSAPSPLGPQPSHLGPQPSHLGPQPSHLILGPSLLGPFSSNHLYSDPGHITHHPPR
HGKPKLGCIQPPPSAYTHPQTPGPVPANPSHKLSKPGQAQPPSILCISSHLQHSYRELDF
RLNGSLLTSYEKTGSVKMNWVQELGGEDPCQNSQRGEGPHSDQRSRPSCEWCHKASGPLP
TRPTPTTDRGLPHTLQSIPPQPDSPLSKPPIQHDTPRPPPVSHHRHHAQPANEQRPKPPP
PTYQEAMAASASRPLDLPPQSDFPPEKPLPPANPNPSPSPVCLNGSHHNVFPSNPTPLET
NNLSANAFPSNSAPLETNNLSANTFPSNPTPLETNNLSANAFPSNPAPLETNNLSANAFP
SNPTPLETNNLSANAFPSNPTPLETNNLSANAFPSNPAPLETNNLSANAFPSNPTPLETN
NLSANAFPSNPAPLETNNLSANAFPSNPTPLETNNLSANPFPSNSAPPQHDQQSAKVKTG
GIISEFYSHSRLHHISTWRSEFSEYVNMLQSRRRATGGTTFPGRDRLRRQRREGLSAAPG
PQSCILHVDMDCFFVSVGIRHRPDLKGKSVAVTSNRGSGRVAQRPGVDRQLELQYYQKKY
DYPAVSERKDGDLEEITSSETESHISHGNSVDQGTAALSMAEIASCSYEARQAGVRNGMF
FGQAKQLCPSLQSVPYDFQAYKKVALAMYETLASYSHDIEALSCDEALVDSSALLAELSV
TPDELASAIRADVRERTGCSASVGMGSNILLARMATRKAKPNGQYFLRSEEVDDFIRDQT
VTSLPGVGRSMGGKLASLGVRSCGDLQQVSLQRLQKEFGPRTGQTLFRFCRGLDDRPVRS
EKERKSVSAEMNYNIRFTQVDEAESFLTNLSIEVQKRLQWAGLRGRRLTLKVMVCKAGAP
LEPSKYSGHGTCDNLARSVTLAQLTDCGHLIASEVIKLFHTMRLKVQDMRVGLQVQLLKG
GPLRPQGPLVYSLPNTAITDTCTNQEKSSSARVLPPFSTPCPTSPAEPIPGTTQVSQDTC
CMCVHVCLCPCQVDRSVLEALPAELREQVEHSWTHRHTERTHNRSHQHPLHPYPSSPGPS
SPLSSCSSSPLPSPPPLAAPPVGALVIQIPNQPGQTGSTGIILELPDFSLVDPEVFAALP
RELQEELRSAYGRRENAQAQGIMADQRNPLLHLKHVGVGRMKRCYKKNANNSPAKKGPSP
LKRPRPPGNSPAKDLPHVLRSRDLPNGLKLETGPSTSSLQQDDPETLSKFTPRPEPTLAG
ACDFMDIRTLIREWVTTISDPMEEDILQEIKYCTDLINDKNLEKIDLIIKYMKRLMQQSV
ESVWSMAFDFILDNVQVVVQQTYGSSLKIT
NT seq 4773 nt   +upstreamnt  +downstreamnt
atggctgccaaggtgtccaagctggatgagcagttaaagctggacgccccgagagagaag
ccgaaagatggcgcctgctccagcatcttcactggggtggccatctatgtcaacgggtac
acagagcccagtgtggacgagctgcgcaggctgatgaatctgcatgggggtcagttccac
gtgtactactcccactctaacaccacccacatcatcgctaccaacctgcccaacagtaag
atacaggagctgagggaccagaaggtggtccggccagagtggatcactgacagtatcaag
gctggccatctcctgtcctacttgcagtaccagctctatgccaagcagaaaggcctgagc
ttccccagtgtgtctgttcaccagggccaagagcctgcaggacccctccatgggcacctc
ctacccagccacagcctccctttacccagcctcaataaccacaacccagcccctagcctt
gggcagcccctatccaggcaccacactcctacatccagccacagtcatctacacacagac
aatctacaccaccaacccaaccactataaccccctagctagccacctcagcccccagccc
agccactctctccccagccacctcggcccccagcccagcaactctccgaccagccacctc
ggcccccagcccagcaactctccgaccagccacctcgccacctcggcccccagcccagtc
caggcccagttcaactcggcccccagcccactcggcccccagcccagccacctcggcccc
cagcccagccacctcggcccccagcccagccacctcattctaggacccagccttctcggc
cccttttcctccaaccacctttactctgacccagggcacatcacccaccacccacccagg
cacgggaaacccaagttaggctgcatccagcctcctccttcagcctatacccacccacag
acccctggtcccgtccctgcaaaccccagccacaagctctctaaacctggacaggcacaa
cctccttccatcctctgcatctccagtcacctccagcacagctaccgggagctggacttc
agactgaatggatcattactgacctcttatgaaaagactggtagcgtcaaaatgaactgg
gtccaagagttgggtggtgaggacccctgtcaaaactcccagaggggtgaaggaccccac
tctgaccaacggtcacgcccatcctgtgaatggtgccataaagcctctggacctctcccc
acacgacccacacccactacagacagggggttaccccatactctccaatccataccccca
cagcctgacagccccttatccaaaccccctatccaacatgacacccccagacctccccct
gtctctcaccacagacaccacgcacaaccagccaatgaacagagacccaagccccctccg
cccacctatcaggaggccatggctgcctctgcatcccgccccctagatctcccgcctcaa
tcagatttccctcctgagaaaccactcccccctgctaacccaaacccctccccttcccct
gtctgtctgaatggcagccaccacaatgtttttccttctaaccccacccccctggaaacc
aacaacctatcagccaacgcctttccctcgaactctgcccctctggaaaccaacaaccta
tcagccaacacctttccttctaaccccacccccctggaaaccaacaacctatcagccaat
gcctttccctcgaaccctgcccccctggaaaccaacaacctatcagccaacgcctttcct
tctaaccccacccccctggaaaccaacaacctatcagccaacgcctttccttctaacccc
acccccctggaaaccaacaacttatcagccaacgcctttccttctaaccctgcccccctg
gaaaccaacaacctatcagccaacgcctttccttctaaccccacccccctggaaaccaac
aacttatcagccaacgcctttccttctaaccctgcccccctggaaaccaacaacctatca
gccaacgcctttccttctaaccccacccccctggaaaccaacaacttatcagccaacccc
tttccctcaaactccgctcctccgcaacacgaccaacaatcagcaaaggtaaagaccggg
gggatcatctcagagttttactcccactctcgtctccaccacatctccacgtggaggagt
gagttctctgagtatgtcaacatgttgcagagcaggaggagggccacagggggtaccacc
ttccccgggagagacaggctcagacgccagaggagagagggtttgtcagctgctcctgga
cctcagtcctgtatcctgcatgtggacatggactgtttctttgtctccgtggggatcaga
caccgaccagacctcaaagggaagtctgtagcggtgaccagtaaccgtggttcaggcaga
gtggcccagagacctggtgttgaccgccagctggagctgcagtactaccagaaaaaatat
gactatccagctgtgtcagagaggaaggatggggacctggaggaaattacatcatcagag
acggagagtcacatctcccatggcaacagtgttgaccagggtactgctgccctctctatg
gctgagatcgcctcctgtagctatgaggccaggcaggcgggggtgaggaacgggatgttt
tttggccaggccaaacagctgtgtccctccctgcagtcagtcccttatgacttccaggcc
tacaagaaggtagccctggccatgtacgagaccctcgccagttattctcacgacatcgag
gccctgagttgtgacgaggcgttggtggatagctccgccctgctggccgagttgagtgtt
acaccagatgaacttgccagtgccatccgggcagacgtcagggagaggactgggtgctcc
gcctcagtgggcatggggtccaacatcctgttggcgagaatggctacccggaaggctaag
ccgaacggacagtacttcctgaggtcagaggaagtggacgacttcatcagggaccagacg
gtgaccagcctaccaggtgtgggccgttctatgggtggtaaactggcatctctgggtgtg
aggtcatgtggggacctgcagcaggtgtctctgcagcggctgcagaaggagtttggccct
cgcaccggtcagaccctcttcaggttctgccgaggtctggacgaccggcccgtccgtagc
gagaaggagaggaagtctgtctcggctgagatgaactacaacatccgcttcacacaggtg
gacgaggcggagtcgttcctgaccaacctgtccattgaggtgcagaagcgtctgcagtgg
gcgggacttaggggtcgcaggctgaccctaaaggtcatggtctgtaaggcaggggccccg
ttggagccatccaagtacagtggtcatggcacctgtgacaatttggctaggtcagtgacc
ctggcccagcttacagactgtggtcatctgatagccagtgaggtcatcaagctgttccac
acaatgaggctgaaggtgcaggacatgagggtgggcctccaggtgcagctccttaagggg
ggcccactccgtccccaaggacccctcgtgtattcgctacctaataccgccattacagac
acatgcaccaatcaggagaagagttcctctgccagagtcctgccccccttctccactccc
tgccctacatcgcctgctgagccaatcccagggacgacacaggtttcccaggatacatgt
tgtatgtgtgtccatgtgtgtctgtgtccatgtcaggtggaccggtcagtgttggaggcc
ttgcctgcagagttgagagaacaggtggagcactcctggacccacagacacacagagaga
acccacaacaggtcacaccaacacccccttcacccgtacccctcctcccccggcccctct
tctcctctctcttcctgttcatcttcccctctaccctctcctcctcccctcgctgcccct
cctgtaggagcactggtgattcagatccccaaccagcctgggcagaccggctccacaggc
atcatcctggaactgcctgacttctccctggttgacccggaggtgtttgcagcactcccc
agagaactccaggaggagctgcgttcagcgtacggccgtagagagaacgcccaggcccag
gggatcatggcagaccagaggaaccccctgttgcatctgaagcatgtgggggtgggtcgg
atgaagcgctgctacaagaagaatgccaacaatagccctgccaagaaaggcccctcccct
ctaaagaggccccgcccaccaggaaacagcccggccaaagacctaccacacgtgctcaga
tctagggacctacccaatggcctcaagctggagactggaccttccacctcctccctacag
caggacgacccagagactctgtccaagttcacccctcgccctgaacccaccctcgctgga
gcctgtgatttcatggacatccgaacactaatcagagaatgggtcactaccatatcagac
cccatggaggaggacattctgcaggaaatcaagtactgcactgatctgatcaacgacaaa
aacctagagaaaattgacctgatcatcaagtacatgaagaggttgatgcagcagtctgtg
gagtctgtatggagcatggcctttgacttcatcctggataacgtgcaggtggtggtacag
cagacctacggcagctctctgaagatcacgtag

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