Salmo trutta (river trout): 115162594
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Entry
115162594 CDS
T08542
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115162594 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115162594 (fancm)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
115162594 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Motif
Other DBs
NCBI-GeneID:
115162594
NCBI-ProteinID:
XP_029569910
Ensembl:
ENSSTUG00000022739
LinkDB
All DBs
Position
25:42621568..42683449
Genome browser
AA seq
2164 aa
AA seq
DB search
MSGVNQMTLFQTWGASVPQKVSQTNNVKKSSGRRKTTQNSRDSTAASVKTQKRATGITLP
PPAPRNTLWGEFGQGSTADSEVRDVEEVAAAAAAAAADDDDDDDDDDDDLMVVAVYEAEK
SLQIDGNFGQHSEHTTNVESTCLTQISSSGSTYYKDFPGLDSSSAKVWIYPTNYPIRDYQ
LKISEAALFQNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACY
KVMGIPQTHMAELTGSTQAQQRQELWRSRRIFFLTPQVLVNDLSRATCPALNVKCVVIDE
AHKALGNHAYCQVVRQLGSQTRQFRILALSATPGGDTNSVQQVISNLLISHIELRSEESP
DIQAHSHQRSLEKVVVPLGESLAGHQALYLQVLERFMGRLIQNRAMSHRNLHSLTKYQLI
LSREQFRKNPPPHVTGALHGALEGDFALCISLYHGYELLLQMGLRSLFLYVQGIMDGTKE
KSRARNELQRNATFMDLYQEMEAMFVKPTGPEEPFIYSHPKLQKLEEVVLGHFKTWAESS
STGSGPQEVSTRVMIFSSFRESVQEIAAMLNRHLPLVKVMTFMGQASAGKGVKGFTQKEQ
LEVVRRFREGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRKRQGRI
VVILAEGREERTYNQSQSNKRSVYKSIVGNSHRFHMFPHNPRMLPGGVHPALHKMHITCG
QFVHRESSGRLSGGWRGHRSHSLEGQRESLILPHGLVGHQESMKKDGFLSPSELTYWEST
MKLGEGEAPPILRRSRFLSKQEGSPPRVEPLSSGPTRELSLWEWRHWQNQPFPTHIVDHS
NRCHHFTKVMELIDGLRQEEGESRYELELLPHLHKADVIGLTEEEQKEKSTKGKKQKEGK
TIKSRTKMANLSHKQKTSCLSSADLDCVEFKKEVQRESISKAETLSPWTLIKDRVPSECH
KEVTHDLRDHPGLWPISSTGDQPIMDMDFDCIILNNESESSEVNSPRDLVSESVNCIAAV
EQIDLNQLTSIADREPKSDEDSELEALFYLPKWDAAVPKLQPLRQRLESLRVILVNVTEL
LSRSPPALHFDLDSPQVDPGPTPFTTMDCSHTLPVEPLDELLDVGQTFHVNFSLEVDEDF
ADPASQSPNVDLEVGSLDCESHCEPHQQHSPSSAITVPADSMGRERALGSPSWDEVFEDD
SNDIKDEDMDEKADFKPPCHPTQPKAQHAKTNLDESMDLFGDDETFLQMTIPDIPTPENV
SIRIPSPLKAPEREWLIGSSKSVTETNMGYQVKPSCSHASPVAQQEPAQDFENFDCSQDF
FSVNFDLGWEEDEGDTEAAPSPFPSKPSPPGSKKQEASLSSSVNGPKISVSSAPPFSFHR
KSVSTPLAACPGGKRAETSALASPQTSPLTSKSGALFSPIPTLGPRRALLPGPSTTPSTS
FSFLKRKRQGTLQNALTPKAQSGDPGNGSIEMGHSLSHKSILDSPHPGLCTSDSEEEVIT
RKRVHHHVKANPLSSPVSMLLSDVDSPIQVTRKSKHAVARISDESEGEGEAMSDDDFQNT
SVRQPRAPPHVAVKPSASHGKAKQVVQHHRQGARHFLDEEAALSEGGEVSSDEEDGEEQN
RSLEGFVVSNTQCSQGINDSEMQGVYLKSVRSPAVAGKFKMIYKQNHNMDIFSQVPELDE
TYAEDSFVVSGSDEEELGEEDEEVPLELIYEDSFVEGRRQYPTRRKVLIRNIRAQAGSGP
ATLDKRAADPQPNPAGKNKRSRIVHLEDSSSEEEVEKSRNSVKAEGVAAICRLTELQQQN
DWVFKAPQQQVPPSGTTRASTASCVVGPRVLSGARSSSMNSVMEPSAPSGTSRTSSVSSV
RGPREEQQEERCRQRLHQQALLSEELDFEQSESLLFSSKQPQATSSTSSVPHAPSSFCQA
ATLSKPPPSSSNPSGLVSVLVDSRCITACVDVVSSLRQRYAVTAHVCSLDGCDFVVSNRM
AVERQCQSELAGMPNRKRLVERVTSLQGLFERVCLIVEKDRTKPGEASRPFQPTRYYDST
LASLVRAGVRLLVSGGPEESAILLAELARVEQRKGQAISVPLEVKGHRQQALLFYRTLPC
VSYVNALNMSHSFRSVGHLVNSSIEALQRGACVSRPRAEEIYRCLRYSCDTTLMTTNTPR
KNDL
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgtgaaccaaatgactttgttccagacgtggggagcatctgttccgcaaaag
gttagtcaaacgaataatgtaaagaagtcttccggacgacgaaaaacaacccaaaacagc
agggacagcaccgcagcctcagtcaagactcagaagagggcgactggtataactttgccg
cccccggcgccacgtaacacgctatggggtgaatttggtcaggggtccacagcagacagc
gaggtgagagatgtcgaggaggttgctgctgctgctgctgctgctgctgctgatgatgat
gatgatgatgatgatgatgatgatgatttaatggtagttgctgtttatgaggcggaaaag
tctttgcaaattgatggaaactttggacaacatagtgaacacacaacaaatgttgagagc
acttgtctcacacagataagctcaagtggatcaacatattacaaagacttccctggcctt
gacagctcctctgcaaaggtatggatctaccccaccaactatcccataagggactaccaa
ctaaagatatcggaggcagctttatttcagaatacgctggtatgcctccccactggcctg
ggaaagactttcattgctgctgtggtaatgtacaacttttatcgatggtatccatctgga
aagatagttttcatggcaccaacaaaaccgctggtggcacaacaaatcgaagcgtgctac
aaagtgatgggtattccacagacacacatggcagagttgacagggagcacgcaggctcag
cagaggcaggaactgtggcggtccaggcgcatcttcttcctcactccccaggtattggtg
aacgacctgtctcgagccacctgccccgcgctgaacgtcaagtgtgtggtgattgacgag
gctcacaaggcactggggaatcacgcctattgccaggtggtgagacagttggggagccag
actcgacagtttcgcatcctggcactcagcgccacgccaggtggagacacaaattcagtg
cagcaagtcatatccaacctgctgatctcccacattgagctgcggtctgaagagagccct
gacatccaggcccactcccaccagcgcagcctggagaaggtggtggttcccttgggggag
tcgctggccggacaccaggccctctacctacaggtactggaacggttcatgggccgtctg
atccagaacagggcgatgtctcaccgcaacttgcactccctcaccaagtaccagctcatc
ctgtcccgggaacagttccgcaagaaccctccgccccacgtcacgggggctctgcatggg
gctctggagggggactttgccctgtgtatcagcctgtaccatggctacgagctgctgctc
caaatgggcctgcgctccctcttcctctatgtccagggcatcatggatggcaccaaagag
aagtctcgagccaggaacgagctacagcgcaacgccaccttcatggacctgtaccaggag
atggaggccatgtttgtaaagcccaccggccccgaggagcccttcatctacagccacccc
aaactgcagaagcttgaggaggtagtgctagggcactttaaaacatgggctgagagctcc
agcactggctctgggccccaggaagtgagcacacgagtgatgatcttttcgtcgttccgg
gagagtgtgcaggagattgccgccatgttaaatcgccacctgcccctggtcaaagtcatg
acctttatgggccaggcctcggcagggaagggggtcaaagggttcacccagaaggagcag
ctggaggtggtgcggagatttcgggaggggggcttcaacaccctggtgtccacctgcgtg
ggtgaggagggactggacataggcgaggtggacctcattgtgtgcttcgacgcccagaag
agtcccatccgcctggttcagcgcatgggccgcaccggacgcaaacgccagggccgcata
gtggtcatcttggccgagggacgagaggagagaacctacaaccagagccagagcaacaag
cgcagcgtgtacaagtctatcgtggggaacagccacagattccacatgttcccccacaac
ccccgcatgctgcctgggggggtgcaccccgccctgcacaagatgcacatcacctgtggc
cagtttgtccaccgggagagcagcgggcggctctccgggggttggagggggcacaggtcc
cactccttggagggccaacgtgagtcccttattcttccgcatggtctagtcgggcaccag
gagagtatgaagaaggatggcttccttagcccctctgagctcacttattgggagtctacg
atgaaactgggggagggggaggctccacccattctgagacggtcccgtttcctctcaaaa
caggaaggctcgccacctcgggtggagccgctctccagtgggccaaccagggagctgtct
ctgtgggagtggcgacactggcagaaccagcccttccccactcacattgtggaccactcc
aaccgctgccaccacttcaccaaggtcatggagctcattgacggcctgcgccaggaagag
ggtgaaagcagatatgagttggagctgctgccccacctccacaaagcagatgtcataggc
ctcacggaggaagaacagaaggaaaagtccaccaaaggaaagaagcagaaagagggaaaa
acgataaaatccagaaccaaaatggccaacctgagccacaagcagaagacttcctgcctt
tcctcagctgacctagactgtgtcgaattcaaaaaggaagtgcagagggaaagcatttct
aaagcagagactctctctccatggaccctgataaaggacagagtcccttcagaatgtcac
aaggaggtgactcatgacctcagagatcacccaggcctctggccaatctcctccaccggt
gaccagccaatcatggacatggattttgactgtatcatactcaacaacgagagtgaaagt
tcagaggtcaattctccaagggatttggtgagcgaatcagtgaactgcattgctgctgta
gaacagattgacctcaatcagttgacctcaattgcagaccgtgaacccaagtcagatgaa
gattctgaactggaggctttgttttacttgcccaaatgggacgctgccgtccccaagttg
cagcccctgagacagaggttagagagcttgagggtcattctagtcaacgtcacagagctt
ctgtctaggtctcctccagctttgcactttgacctggacagccctcaggtcgaccctggg
cccacccccttcaccaccatggactgttcacatacacttccggttgaacctctggatgaa
ctgctggatgtgggtcagacattccacgtgaatttctccctggaagtggatgaggacttt
gccgatcctgcttctcaatctcccaatgttgatttagaagttggttctctagactgtgaa
agccattgcgaaccacatcagcagcactccccttcttcagccattactgtgccagcagac
agcatgggtagggaaagggcccttggcagccctagctgggatgaggtcttcgaggatgac
agcaatgacataaaggacgaggatatggatgagaaagcggacttcaagccaccatgtcat
cccactcagcctaaagcccagcacgctaaaaccaacctagacgagagcatggacctgttt
ggagatgacgagaccttcctccagatgaccatcccggacatccctacgccagagaacgtc
agtatccgaatacctagccccctgaaggctccggagagggaatggttaatagggtcaagt
aaaagtgtgacagaaacaaatatggggtatcaggtcaaacctagctgtagccatgcttct
cctgtagcgcagcaggagcctgctcaggactttgagaactttgactgttctcaggatttc
ttctctgtcaactttgacttgggctgggaggaggatgaaggggacacagaggctgctcct
agtccgttcccctcaaaaccttcaccccctggatccaaaaaacaggaagcatccctttcc
tcctcagtgaatgggccaaaaatctctgtctcatccgctcccccctttagtttccatagg
aagagcgtgtccacacccctggcagcctgtccgggagggaagagggcagaaacctctgct
ctggcttcgcctcagacctctcctctgacctccaagagcggagctctgttctcaccaatc
cctacattaggaccgaggcgagctctcctacctggtccttccaccaccccatccacttca
ttctcattcttaaagaggaaacgccaggggaccttacagaatgccctgactcccaaagct
cagtcgggggacccaggaaatggttcaatagagatgggacacagtttgtctcacaaatcc
atcctggactcccctcatccaggcctgtgcaccagtgacagtgaggaggaggttatcacc
cgtaagcgggttcatcatcatgtcaaggcgaaccccttgtcttctccagtgtcaatgctt
ctcagtgatgtggattctcctatacaagtgaccaggaagtcaaagcatgcagtggcacgc
atttcagatgagagcgagggggagggggaggcaatgtctgacgatgacttccagaatacc
tctgttcgacagccaagagcgcccccccatgtggctgtgaaaccatcagcatcgcatggg
aaagctaagcaggtcgtgcagcaccaccgccaaggagcccgtcactttctggacgaggag
gcggcgctgtccgaggggggggaggtgtcatctgatgaagaggacggtgaagagcagaac
cgctcactggagggcttcgttgtgagcaacacccagtgctcccagggaatcaacgattct
gagatgcagggggtttacctaaagtcagtgagaagccctgctgtggctggcaagttcaaa
atgatctacaagcaaaatcacaacatggacatcttctctcaggtgcctgagctggacgag
acgtacgcggaggacagctttgtggtgagtggcagtgatgaggaagagctcggcgaggag
gatgaggaggtcccattggagcttatctacgaggactccttcgtggaggggaggaggcag
taccccaccagacgcaaggtgctgatccgaaacatcagggctcaggctgggagcgggcct
gccactctggacaagagggctgctgaccctcaacctaaccctgctgggaaaaacaagcgc
tcccgcatagtgcacttggaggactccagctcggaagaagaagtggagaaaagtagaaat
agtgtgaaagctgaaggtgttgctgccatctgcaggctaactgagttacagcaacagaat
gactgggtgtttaaagctccacagcagcaggtgccccctagtggaaccaccagagcctcc
acagcgagctgtgtggtggggcctagagtcctcagtggagccaggtcctcctctatgaac
tctgtgatggagcctagcgccccaagtggaaccagcaggacctcctcagtgagctccgtg
agggggcctagagaggagcagcaggaagagaggtgtcgccagaggctccatcagcaggcc
ctcctgtctgaggagctggactttgagcagtcggagtctctgttgttctcaagtaaacag
ccacaggctacctcctccacctcctcagtaccccacgccccgagctccttctgtcaggcc
gccactctaagcaagccccctccctcgtcatcgaacccatcgggccttgtctctgtactg
gtggacagccgctgtatcacagcctgcgtggatgtggtctccagcctgcgccagcgttac
gctgtcacggcccacgtgtgctcgctggacggctgcgacttcgtggtcagtaaccgcatg
gcggtcgagaggcagtgccagtcggagctggccgggatgccgaaccgcaaacggcttgtg
gagagggtgaccagtttgcagggcctatttgagcgggtctgtctcatcgtagagaaggac
cgcaccaaaccaggtgaagcttcccgtcctttccaacctacacgctactacgacagcaca
ctggcaagcttggtgcgggcaggcgtccgactcctggtgagtgggggacctgaggagagt
gccatcctactggctgagctggcccgagtggagcagaggaaaggccaggctattagcgtg
ccattagaggtcaaaggtcaccggcagcaggcgctactcttctaccgaacgctgccctgt
gtcagctatgtcaacgccctcaacatgagccacagcttcagatcggtgggccacctggtc
aacagctctatcgaggctctacagaggggggcgtgtgtgagccgccccagagccgaggag
atctaccgctgcctacgctactcctgtgacaccaccctgatgactaccaacacacccagg
aagaacgacctttag
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integrated database retrieval system
