Salmo trutta (river trout): 115167028
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Entry
115167028 CDS
T08542
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04217
Necroptosis
stru04622
RIG-I-like receptor signaling pathway
stru04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115167028
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115167028
04625 C-type lectin receptor signaling pathway
115167028
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115167028
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115167028
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115167028
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C67
115167028
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115167028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
115167028
NCBI-ProteinID:
XP_029576913
Ensembl:
ENSSTUG00000011074
LinkDB
All DBs
Position
29:complement(18016329..18057796)
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AA seq
965 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVILVEEELDFHPLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEASEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKAKSKGLGLQCGSRSKSEFYYTLNGS
SVDHPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNETTPPTRAPPSASLSNDNKFHSLPF
SLSRKTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSPTPPSPRPPSPPISRGGGGVPGLE
VGSLVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKA
LFVKLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTESDGLDIMVGKK
KGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIH
GYVCATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQD
CYFYQIFMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFP
SLELDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRK
AHRHGKLSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSM
ADRDGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPT
MSLYK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccctgaggatc
ccccggggcagcctgggacaggcttgtcaggagaggaacagcctggggcgcacgctaccc
cccagcaaaggcaagaggagcctacgcgtcctggaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagccccggctggagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtttggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaggatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcatcctggtggag
gaggagttggatttccatccgctggagatcaactccagggtcctggtccagaccagagag
gggccggaaagaggaaccatcatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgacggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagaagcttcagaatactccatgcaggaccagaggctgcagaagcacagttttacc
cccagaggcagcagcagtgacaagtcctcctctggccaaagcaaagcaaagagcaaaggc
ttaggtcttcagtgtgggagtagaagcaagtcagagttttattatactttaaatggcagc
tctgttgaccacccagtccaggcaaaatccaaaagcacatggtacattgatgaagtcggg
gaagacccagccaagtccctcacagacacgccccctgacttcaatgaaaccacacctcct
accagggccccgccctctgcttccttgtccaatgacaataagttccactccctgcccttc
agcctgagccgtaagacggggcccaatggcagcatgagccatggacccctctccctctcc
gtgcagtcagtgatgggagagcagatgcagatgccagagcccccgtcgcccacccctccc
tccccgcggcccccctcaccccccatctctcgcgggggtgggggtgtgcctggtctggag
gtggggtccctagtggaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtg
gggctgcctccgggactaccagagccactggctggcctggagctggaggaagagtgtgtt
ggctgtacagacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggcc
ctgtttgtgaagctgaaatgctgccggcctgactcccgtttcccctccctacaccactcc
tccaaccccatagagagatgcaactctatcgctttcgggggttatctgagtgaggtggtg
catgagaacactcctccacgcactgagagtgatggtctggacatcatggtgggcaagaag
aaaggtatccagggtcactacaactcttgctacctggactccacactcttctgcctgttt
tccttcagctcagtcctggacacggttctgctgaggccgaggtccaagactgacgtagag
tattaccgagagacacaagagctgcttcgcacagagatagtcaaccctctgcgaatacat
ggctatgtgtgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagct
gcctcagggttcacatctgaagaaaaagatcctgaggagttcctcaatattctgttccat
cacatattgagggtggaccccttactcaagctgaggtcggcaggtcagaaggttcaggac
tgctacttctaccagatcttcatggataagaaggacaaagtgggtgtgccaaccagccag
cagctcatagagtggtccttcatcaacagtgacctcaagtttgctgaggctccttcctgc
cttatcatccagatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccc
tcactggagttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgc
gggggtctggctctgtatgaatgcagggagtgctacgaggacggtgacatcactgccggg
aagataaaacagttctgtgaaaagtgcaacacacaggttcacctccacccgaggaggaag
gcccatcgccacggcaagttgtccgtccccaaggaactgcaggagggtgtgtggcggcag
ggtagcttccctcgccagcggatggagctgttcgctgtgctctgcatcgagaccagtcac
tatgtggccttcgtcaagtacggccaccaagactctgcatggctcttcttcgacagtatg
gccgaccgcgacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggag
gtgggggcctatctgaagatgacccctgaggagctccatgccctggaccccaagagcatc
cagggccaggcccgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccacc
atgagcctgtacaagtag
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