Salmo trutta (river trout): 115167210
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Entry
115167210 CDS
T08542
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167210
03036 Chromosome and associated proteins [BR:
stru03036
]
115167210
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115167210
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115167210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
LIM
DTHCT
Motif
Other DBs
NCBI-GeneID:
115167210
NCBI-ProteinID:
XP_029577248
Ensembl:
ENSSTUG00000036022
LinkDB
All DBs
Position
29:25240329..25252953
Genome browser
AA seq
804 aa
AA seq
DB search
MRARAPSITCMVMLQKHPQYRARHMRVNRVVSMEGEVVSIETTQVEGLQDSGEGAELLQT
ADAALMEGGVAPQEVTGNVEMMVMDTLDSTLDPALLQMKTEVLEGGGTVTVTGGDEGQII
TLQVSVVNMEQTSAALGLGQLQLVQVPVTTATVEELQASFVDASAGNTEAEPVICHTLPL
PEGFQVVKVGANGEVETVEQEELQAAQDELQVIHREEEEEEEEAEPQVEDQTWSKDPDYQ
PTAGIRKGKKGKKSRLRYGEGERDMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTK
IKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTH
TGTRPHKCQDCDMAFVTSGELVRHRRYKHTFEKPFKCSMCDYASVEVSKLKRHIRSHTGE
RPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK
FHCPHCDTVIARKSDLGVHLRKQHSFMEMGRKCRYCDAMFHERYALIQHQKSHKNEKRFK
CDQCDYCCRQERHMIMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPTAFV
CSKCGKTFTRRNTMLRHAENCNGENTGDENGTPPKKGRRGRKRKMRSRRDDDDDDTEPEL
DDIEEEEEEEEEELLAEIEVEQAPPVVPVPAPVGPPAKRKRGRPPKAKPAPTEAIIRVED
ETTGEVDDIIVKKEMKAEKASQEEEAVEDEEPAVEVEHAEGEPANQLEESFQGEEVVQEV
ALSVTEAPPNGDLTPEMILSMMDR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcgagctccctctataacctgcatggtaatgttacaaaaacatccgcaatac
cgggcaagacacatgagggtgaatagggtcgtttctatggagggtgaagtcgtttccatt
gagaccactcaggtcgagggtctccaggacagtggggagggagcagagctgctccagact
gcagatgctgccctgatggaggggggtgtggcaccccaagaggtgacggggaatgttgaa
atgatggtgatggacaccctggactcgacccttgaccctgccctgctacagatgaagact
gaggtccttgaagggggtggcacagtgacggtcaccgggggagacgagggacagatcatc
accctgcaggttagtgtggtgaacatggagcagacgagtgcagcactggggcttggacag
ctgcagctggtgcaggttcctgtcactacagccaccgtggaagagctccaggccagcttc
gttgacgcctcagcaggcaatactgaggcagagccagtgatctgccacaccctccctctg
cccgagggcttccaggtggtgaaggtgggggcgaatggagaggtggagacagttgagcag
gaagaactgcaggcagcccaggatgagctccaggtgatccacagggaggaggaggaggag
gaggaggaagctgagccccaagtagaggaccagacatggtcaaaagacccagattaccaa
ccaactgctggcatccgcaaggggaagaagggcaagaagagccgcctgcgttacggggag
ggggagcgtgacatggacgtgtctgtgtatgactttgaggaggagcagcaggaggggatg
ctctctgaggtcaatgctgagaaggttgtgggcaacatgaagccgcccaaaccgaccaag
ataaaaaagaaaggtgtgaagaagacgttccagtgtgagctgtgtagctacacctgcccc
cggcgctctaacctggaccgccacatgaagagccacacagatgagaggccacacaaatgc
catctgtgtgggagggccttcagaacggtcacactactgaggaaccacctcaacacacac
acgggcactcgtcctcataaatgccaagattgtgacatggcatttgtgaccagtggagag
ctggtgcgtcatcgtcgctacaaacacacattcgagaaacccttcaagtgctccatgtgt
gactacgctagtgttgaggtgagtaagctgaagagacacatccgctcccatacaggcgag
aggcccttccagtgcagtctgtgcagctacgccagccgagacacctacaaactgaagaga
cacatgaggacacactcaggtgagaagccgtatgagtgctacatctgccatgctcgtttc
acgcagagcggcaccatgaagatgcacatcctgcagaagcacacagagaatgtggccaaa
ttccactgcccccactgtgacacagtcatcgcccgcaagagcgacctgggtgtccacttg
cggaagcagcattcattcatggagatgggcaggaagtgtcgttactgtgacgctatgttc
cacgagcgttacgcactcatccagcaccagaaatcccacaagaacgagaagcgcttcaag
tgcgaccagtgtgactattgctgcagacaggagcgtcacatgatcatgcacagacgcaca
cacacgggggagaagccgtacgcctgcagccaatgtgagaaaactttccggcagaagcag
ctgctggacatgcatttcaaacgttaccatgaccccaacttcatccccactgccttcgtc
tgcagcaagtgtggcaagacctttactcgcaggaacaccatgctgcgtcacgcagagaac
tgtaacggagagaacaccggcgatgagaacggaaccccgccaaagaaaggccgccgcggc
aggaagaggaagatgcgctccagacgagatgacgacgatgatgacaccgagcctgagctg
gatgatattgaggaagaggaggaggaggaggaggaggagctgctagctgagattgaggtg
gagcaggcaccaccggttgtccctgtccctgcccctgttggcccgccagccaagaggaaa
cgtggaagacctcccaaggccaaacctgccccaacggaggcaattatccgggtggaggat
gagaccacaggcgaggtggatgacatcatcgtgaagaaagagatgaaagccgagaaggcg
agccaagaggaagaagctgtcgaggatgaggagccagcagtagaggtggagcatgctgaa
ggagagcctgccaatcagctagaagagtcattccagggggaggaggtggtgcaagaagtg
gcactgtctgtcacagaggctccgcccaacggtgacctcactcctgaaatgattctcagt
atgatggaccggtga
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