Salmo trutta (river trout): 115167285
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Entry
115167285 CDS
T08542
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115167285
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115167285
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115167285
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115167285
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115167285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
115167285
NCBI-ProteinID:
XP_029577410
Ensembl:
ENSSTUG00000050457
LinkDB
All DBs
Position
29:27614855..27642702
Genome browser
AA seq
1396 aa
AA seq
DB search
MEMVPSEENQLVPKEGMFWSCRQSIFDEMKKRFSQIENAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLSKLFEDVAHKASYVNGTFDLAWGKTGDMGSLDPSSEMSLTESGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDSSQERFIGPLPRDGTVGCSSDCSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYSSVEEALQA
FVQPETLDGVNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMGPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKVPSLNTSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSK
ITQEDIRKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLV
QREKESEEQEKRQREIERNTCKIKLFCMHPVKTMALMENKLEVHKDKTLREATEMAYKLM
ELDGVVPLDCCRLVKYDEFHEYLERSYEGEDDTPMGLLLGGVKSSYMFDLLLETRRPEQV
FQPYKPGEVMVKVHVVDLKTDTIAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLE
RCYNDLRLVYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLF
VSLPVQSPGTNRTICPKVCGDTEECSEGSKGNRNSVEAILEESTEKLKNLSLQQQQGSST
SDSQKSSDTSDFEHIESPSPSQEPDSSVSAAVAVDNRELENRIRAAGGGTYSDPETQFPG
EERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANE
GKKETWDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLVHVDKR
ITLSAFKQNLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALK
KGEYRVKVYQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLR
KKTWKNPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKL
EPFQEVVLESSSVEELKEKLSEISGIPLENLDFAKGRGTFPCDISVLEIHQDLDWNPKVS
TLNVWPLYICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGHRVSYSPRKEKA
LKIYLDGGPVKDPGQD
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagagggtatgttttggagt
tgcaggcagagtatttttgatgagatgaagaagaggttttctcagatagagaatgcggca
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacggtcaacgag
aggctcaccctcaacctgccagcctccactaccctctccaaactctttgaggatgtggcc
cacaaggcgagctatgtgaacggcacctttgacctggcatggggcaagaccggggacatg
gggtcgctggatcccagcagtgagatgtccctcactgagtctgggttcgagcccgggaag
aggaacttcctccagctcacagacaaggacggagaacagcctcagattgcgtcggatgag
tcggggacagcgggcagcagtggtctggatgacagctcccaggagcgcttcatcggtcca
ctgcccagagacggcacggtgggctgcagcagcgactgcagcagccccagctactcctac
tcctccatactcaacaagtctgacacaggatatgtgggtttggtgaaccaggccatgacc
tgctatttgaacagccttctacaaactctgtttatgaccccggagttcagaaatgcactg
tacaactgggaatttgaggagtcggaggaagacccggtcaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagacaagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccctggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctgtaccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacttacctggacatccctctg
gtcatcagaccctttggggccagccaggcttatagcagcgtggaggaggctctgcaggcc
ttcgtccagccagagactctggacggggtcaaccagtatttctgtgagcgctgcaagaaa
aaatgtgacgcccgtaaggggctgaggtttctgcactttccctacctgttgactttgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgatcgcatg
tccttccctgaggagctggacatgggtcctttcatcgacgtggaggacgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagtgaccag
atgagcaacgacttctcggcggacgacggtgttgacgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaaggtacccagcctcaacactagttcattgacc
tttgagctgttctcggttatggtccattcgggcagcgctgcaggtggccactattatgcc
tgcattaaatccttcagcgatggccagtggtacagtttcaacgaccagcacgtcagcaag
atcacccaggaagacattaggaaaacgtatggagggtcctcagggagcagaggctattac
tccagtgcctttgccagctctacgaatgcgtatatgctgatttataggttgaaagacccc
tcaaggaatgcaaagtatctggattgtgatgacttccctgagcacataaagcatctggtc
cagagggagaaggagtctgaggagcaggagaaaagacagagggagatcgagcgcaatacc
tgcaagatcaagctgttctgcatgcatccggtgaagacgatggctctgatggagaacaag
ctggaagtgcacaaggacaagacgctcagagaggcaacagagatggcctacaagctcatg
gaactggatggggtggtcccgctggactgctgtcgcctggtcaagtacgatgagttccat
gagtacctggagcgctcgtacgagggcgaggacgacacccccatggggctgctgctgggc
ggggtcaagtcctcctacatgtttgacctgctgctggagacccgcagaccagaacaagtc
ttccagccatacaaacctggagaggtgatggtgaaggttcacgtggtggatctgaagact
gacactatcgcccctcccgtcagcatcagggcctatctaaaccagtcaatcactgagttc
aagcagctcattgcacaggccacagagctctcagccgaaaccatgcgtgtcgttctggag
cgctgctataatgaccttcggcttgtctacgtgcccaacaagacactgaaagcagagggt
ttcttcaggagcaacaaggtttttgtggaaagctctgaatccccagatcaccaggtcacc
ttcactgattccctcttgtggaaactgctggatcgccatgggaacacaatccgcctgttt
gtttcactgcctgtgcaatcccccggcaccaacagaactatttgcccaaaagtttgcggc
gacactgaggagtgctctgaggggtcaaagggcaacaggaattctgtagaggccatcctg
gaggagagcacagagaagctgaagaacctgtccctccagcagcagcagggctccagcacc
agtgacagccagaagagctcagacaccagcgacttcgagcacatcgagtccccctcaccc
tctcaggaaccagactcctccgtatccgctgccgttgcagtcgacaaccgagagctggag
aaccggatccgggcggccggcggggggacctactctgacccggaaacccagttccctggg
gaggagcgctcggactctgaggtgaacaacgaccgcagcacgagctcagtggacagtgac
atcctgagctccagccacagcagtgacacgctgtgcaacgccgacagcggccccatccag
ctggccaatggcctggactcacacagcatcaccagcagccgccgctccaaggccaacgag
ggcaagaaagagacgtgggacacagccgaggaggacagtggcacggacagcgagtatgat
gagaatgggaagagcaaggcggaatcctattacctctacttcagagcagaaccatatgca
caggaggacggctctggggaaggaggccagaaatgtgtactggtccacgtggataagagg
ataactctgtcagcgttcaaacagaatctggagcctttcgtgggggtcacctctacccag
ttcaaggtgttccgcgtctacgccaacaaccaggagtttgagagtgtacggctcaacgag
accctctcttccttttctgacgacaacaagataaccattcgattaggcagagcactgaag
aagggcgagtatcgggtgaaagtgtaccagctactagtgaatgatgcagagccctgtaag
ttcctcgtagacacagtgtttgctaagggcatgactgtgaaacagtccaaagaggagcta
atgcctcagctgaaagaccaatgcaagctggacctcaacattgacaagttccgtctcagg
aagaagacgtggaagaacccagggacagtgtttctggactaccacgtctacgaggaggac
atcaacatctccagtaactgggaggtctttctggaggttctagatggaccggagaagatg
aagtccatgtcccagctggctgtgctgacccgccgctggacccccgcccagatgaagctg
gagcccttccaggaagtggttctggagagcagcagtgtggaggaactcaaggaaaagctc
agtgaaataagtggtattcctcttgaaaacctggactttgccaaggggcgcggaacattt
ccttgtgatatctcggtattggagatccatcaggatctggactggaaccctaaagtgtcc
actctgaatgtgtggcctctgtacatctgtgatgatggtgctgtggtcttctacagggac
agcacagaggagcctatggaacagtctgaagacgaacgcaatgagctgatgaagaaggag
agcagccgcctgctgaagactggccaccgggtcagttactcacctcgtaaggagaaggcc
cttaagatctacctggatgggggcccggtcaaggacccggggcaggactga
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integrated database retrieval system
