Salmo trutta (river trout): 115171309
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Entry
115171309 CDS
T08542
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115171309
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115171309
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115171309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
115171309
NCBI-ProteinID:
XP_029583865
Ensembl:
ENSSTUG00000034472
LinkDB
All DBs
Position
32:18119460..18136242
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AA seq
631 aa
AA seq
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MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGDRLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLIQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTESEKNNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFHGNGSNANNPNLMYQDECNRSMRTVGSKDSRGSSGSFSRDSRDGGSSRAGDR
SSSSYRDRRDSRSYGSSSSYNKYKSGSSNGGQDQSAGQFGSVSRSSQPPPPPSGPQPLMA
QKFTPTQPMMGLMGHSPFQFAPPPTPTSQRK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggttcgtcgtatggagatcgggacagggaccgtggtcgcgatagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggat
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgtccagcgcatgagccagtatgacttggaggagtttcgtaggaag
aaggaaatcactatcagggggtcaggctgcccgaaacctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatacagcagaactttaaggagcccacagct
atccaggcacaaggcttccctctggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcgcatgaatacggaaagtcatcacgcatcaagagcacc
tgtgtctacgggggagcgcccaagggaccccagatccgggacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggatgaggctgacagaatgctggacatgggctttgag
ccacagatccgcaagattgttgaccagattaggcctgacaggcagaccctgatgtggagt
gccacctggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtaggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtg
tgcacggagagtgagaagaacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgcgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acggcctacacattcttcaccccgggcaaccttcgtcaggcccgtgagctgatccgtgtg
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccatggcaacggctccaacgcaaacaaccccaacctg
atgtatcaggatgagtgcaaccggagcatgcgcaccgtaggcagcaaggacagccggggg
agcagcggcagcttcagccgcgacagccgagatggagggagcagccgcgccggggacagg
tcgtcctcttcctacagggacaggagggacagccgcagctatggctccagctcctcctac
aacaagtacaagtccgggagcagcaatggggggcaagaccagtcagcgggacagtttggt
tcagtcagcaggtccagtcagccccctccacccccctcagggccgcagcccctcatggcc
cagaagtttaccccaacccagcccatgatgggattaatggggcactcgcccttccagttt
gctcccccacccactccaacctcacagaggaagtaa
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