Salmo trutta (river trout): 115172303
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Entry
115172303 CDS
T08542
Symbol
catsperb
Name
(RefSeq) cation channel sperm-associated protein subunit beta isoform X1
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115172303 (catsperb)
04040 Ion channels [BR:
stru04040
]
115172303 (catsperb)
Cilium and associated proteins [BR:
stru03037
]
Motile cilia and associated proteins
Sperm associated proteins
115172303 (catsperb)
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
115172303 (catsperb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
DUF6133
Motif
Other DBs
NCBI-GeneID:
115172303
NCBI-ProteinID:
XP_029585497
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All DBs
Position
33:6419445..6465974
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AA seq
1165 aa
AA seq
DB search
MEINRPSIKVTQIIFIITILLVRVQFGTTISDPDDRDEPNDTDEPNDTDEPDDPEQQKLF
QCVSGNMDSKRVRLYLGLDNLVVDCMLRKKPGGSARQYQNQLKLYTSSGLLPTMAIYNST
NSATFPFKLILNASTWRVNVPRYNITINTVAAPVDEWYVEFSMFHGFSMFSSKGSILDTL
KGTLLDVAREPILQWTIGEELSSRIIEPHLHRVLKLQVSQSPCAGDVAVLAPVFAPGGHT
GVILSVTRSAFTAQARWFNATRSLCSLINEVCVSGCAGISIVDLKLTNCHLFLLTNRGLF
ISQDLLSPVTGTLNFTLLFLPALAQMDYSATTLWFSSQCVTDRIYFSDDTLSLISNEGEG
ENLHSRCVYSKYPFTRWFLCQASAADIAKNPKHRYLSFLHDRHQHTGLLLSHTEQNGAMV
SVFGVKAEDLFQRHTKFPPVILDFQPRGIFLLDNHVILYGSEVWTSSDRGSTFTWVFSLD
NQIVIDALSCTVIGVVVFFTDHGNLYIMKSGLARFAWLNETLDVASTLLCGHMGILIAVQ
LDKDKPSGFSYRNIEIDHLIEKHEMGFDKALALQYTTDHTVLLHENAVINDHANGNNHQG
RNNPLTVAPASHFSPDHVGKVIYFSDGGMMVITEVFRTHYLRGFSGVVVGEILEPIKGAS
LNAEPMQLYDLLVKKGEPEGLIVTLQLKDLDPSQGFNLSHVGKAVVAPGFSSYLITGLLP
SGSALAKPTMPALVLPLTSHRSGEWLLFHSAGRGSWGMKEGPCRHALQSLDGMRNNALMR
INVREELNFTFKAFMSDYSLSMVYHKKFMRVVLTNPLAIRVTARHSWDDTNNHMLTLTAF
SHLCKKATTTVTVYIPEASLLCRSSSFTFTLQNSCPEGLQIVYVSQQPISDHEWIYTDPV
DHMDNKRLFNLPVNYRPPSQLGVLIPTTDNIYNADPSHPRPRQHYPISKNSGRYKQCAGK
RSAEECGCTDRLKVSPLAINSDCRQRVLRLTFPVTDFNITLFLRRTNHADQPLCSPYFVT
VTEVNNRTSWKVTGTHATPTMDRMRQYLEDSLENNLYNPEGLQISLYGSELFHFRISVIP
GVVLCDLVEEVQIYVAEPPLAFPTQHLVNNMAAIILGGLLLFGFLLIYNGVAMPTMSSIK
TLLKKHKPTISPTRTQKSTMTQGPE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggagattaatcgaccttcaatcaaggtgacccagattatattcatcataaccattttg
ttagtcagggtgcagtttggaaccaccatatcagacccagatgaccgagatgaaccaaat
gacacagatgaaccaaatgacacagatgaaccagatgacccagagcaacagaaactattt
cagtgtgtgtcaggaaatatggatagcaaaagggttcgactgtacctcggcctggacaat
ctggtggtggattgcatgctacggaagaaaccaggtggctcagctagacagtatcagaac
caactgaagctctacacatcatctggtctcctgcccaccatggccatctataacagcact
aactcagccaccttcccctttaaattaattttgaatgcatccacctggagagtgaacgtc
cccagatacaacattactatcaacacagtggcagcacctgtggatgagtggtatgtggag
ttcagtatgttccatggcttctctatgttcagcagcaagggatccatcctggacacactg
aagggaacactactggacgtggccagagagcccatcctgcagtggacgataggggaggag
ttgtcgtctcgtatcattgaaccacatctccaccgggtcctgaaactacaggtcagccag
agtccctgtgccggtgatgtggccgtgctggcacctgtcttcgctccaggaggacacaca
ggggtgattctcagtgtcaccagatctgccttcaccgctcaggcacgatggttcaacgcc
acgagatcactatgtagcttgatcaatgaagtgtgtgtatctggctgtgcggggatctcc
atcgtggacctgaagctgaccaactgtcacctgttcctgctgaccaaccgggggctcttc
atcagccaggatctcctttcccctgtcacaggcactctcaatttcaccttgctgttcctc
cctgcactggctcagatggactactctgccaccaccttgtggttttcctctcagtgtgtg
acagatcgcatctattttagtgatgacacgctcagtttgatttccaatgaaggagaaggt
gaaaacctgcattctaggtgtgtgtacagtaagtaccccttcacgaggtggttcctgtgc
caggcctccgctgctgacatcgcgaagaaccccaaacaccgttacctgtccttcctccat
gaccgccaccaacacactggcctactgctctcacacactgagcagaatggtgcgatggtg
tcagtgtttggtgtaaaggcagaggatctttttcaacgtcacaccaagttccccccggtg
attctagacttccagcccagagggatcttcctgttggacaaccatgttatcctgtacggc
tcagaggtgtggacgtcgtcagacagaggctctaccttcacgtgggtgttctctctagac
aatcagatcgtgatagacgcgctgagctgtactgtcattggcgtggtagtgttctttact
gaccatggaaacctctacatcatgaagtcaggtcttgccaggtttgcgtggttgaacgag
accctggatgtagccagtactctactgtgtggtcacatgggcatcctgattgctgttcag
ctggacaaagacaaacccagtggctttagctacaggaacatcgagatagaccacctcata
gagaaacatgagatgggttttgacaaagccctggccctccagtacaccacagaccacaca
gtcctgctccacgagaacgctgtcatcaatgaccatgctaacggaaacaaccaccagggc
aggaacaaccctctcaccgtggcacccgccagccacttctcacctgaccacgtgggcaag
gtcatctacttcagtgacggtgggatgatggtgatcacagaagtgttccggactcactac
ctgagggggttctccggggtcgtcgtcggggagatcctggagccaataaaaggagcaagc
ctaaatgcggagcctatgcagttatatgacctgttggtgaagaagggggagcctgagggg
ctcattgttacactgcagctcaaagacctagatccatcccaggggtttaatttgtcccac
gtggggaaggctgtggtagcaccaggcttcagcagttacctcatcacagggctgctgccc
agcggcagtgccctagccaaacccaccatgccagccctagtgctccccctgaccagccac
cggtcaggagagtggctgctcttccactctgcaggccgggggagctgggggatgaaggag
gggccatgtcgtcacgccctgcagtcattggacggtatgaggaataacgctctgatgagg
atcaacgtcagagaagagctcaacttcaccttcaaggccttcatgtccgactactctctg
tccatggtgtaccataagaagttcatgcgtgtggttctgaccaaccctctggccatccga
gtcacagccagacactcctgggacgacaccaacaaccacatgctcaccctcactgccttc
agtcacctctgcaagaaggcaaccaccacagtgacggtatacatcccagaagcctctctg
ttgtgtaggtcctcctccttcaccttcacgctacagaactcctgccccgagggactccaa
attgtctatgtctcccaacagccaatcagtgatcatgaatggatctacacggatccagta
gatcacatggacaacaagaggctcttcaacctgcctgtgaactaccggcctccctcccag
ctaggtgttttaatcccgaccacagacaacatctataacgctgacccaagtcatccccgt
cccagacagcactaccccatctccaagaactctggtcggtataagcagtgtgcagggaaa
aggtcagcagaggaatgtggctgtacagacagactgaaagtctctcctctagccatcaac
tctgactgcagacagagggtgctgaggctaacgtttcctgtgactgacttcaacatcacc
ctgttcctgaggagaaccaaccacgctgaccaaccgctctgctctccttactttgttact
gtcacagaggtcaacaaccggaccagctggaaggtcacaggaacccatgccacccccacc
atggacaggatgagacaatatcttgaagacagtctagaaaacaatctctacaacccagaa
ggactgcagatcagcctttatggctctgagcttttccacttccgtatctctgtcattcct
ggagttgtgttgtgtgacctggtggaggaggtacagatctacgtagcagagcctccgctg
gcgttcccaacccaacacctcgtcaacaacatggcagccatcatcctgggaggcctgctg
ctctttggcttccttctcatatacaacggcgttgccatgccaaccatgagcagcatcaaa
accctcctcaagaaacacaagcccaccatctctccaaccagaacccagaagtctaccatg
acacagggacccgagtag
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