Salmo trutta (river trout): 115178749
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Entry
115178749 CDS
T08542
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115178749
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115178749
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
115178749
NCBI-ProteinID:
XP_029595885
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All DBs
Position
38:6783917..6817274
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AA seq
478 aa
AA seq
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MLMSNDVTSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAAVRGMKRGDPASDAQTSA
ALVESAGAECKRPRIDGSGVVAEVGQNNDPLTLGYHGYPTHSQGSQDAAGGQEGLIPPSF
SAFPPPPPPPQNGLALEYGASLYAAGAIQGSVEAGQAGLNTPTSVPNSLTTHQSDVASQI
DNQLVGTGGGGGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGEG
LAALPYGLLNANSPTAGWKLSPMVGAMYSPELYTDFSGLSLSVPGFPYPAAAAQAATAAA
TFRGAHLRGRGRPVYSAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTAV
ASPAGAAAAAAAAYSDGYGRVYTTDPYHAALNPATAAAYGVGAMATLYRGGYSRFAPY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaacgacgtaacatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcatcccaactcgaccggggcttct
ggcgcagctgtccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcggca
gctcttgtggaatcggccggggcagagtgcaagcgtccccggattgacggatctggagta
gtcgcagaggtcggccagaacaatgaccccctgacccttggttaccatggatacccaacc
cacagtcagggctctcaggatgcagcaggtggtcaagagggtctcatccccccatccttc
tccgccttcccccctccccctcctcccccccagaacggcttggccctggagtacggggcc
agtctgtacgccgcaggggccatccaggggtcggtggaggccggacaggcaggccttaac
actccgacaagcgtcccaaacagcttaacgacccaccagtcagatgtggcgtcccagatt
gataaccagttggtgggtacaggaggtggtggtggcggggggtccgtaggggacgactcc
gagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagaccct
gacctccggcagatgtttgggcaatttggaaagatcctcgatgtagagatcatattcaac
gagagaggatcgaagggttttggctttgtgacgtttgagacgagcgcggacgctgagaag
gccagagccgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaacgcc
acagccagggtgatgaccaataagaaaatggtcaccccatattctaatggaggagagggg
ctcgccgctctaccttacgggctactaaatgccaactccccaacagctgggtggaagttg
agtccaatggttggagccatgtacagtccagagctctatacagatttctctggcctgtct
ctctcagtccctggtttcccgtaccctgcggcggctgcacaggctgccacagcggcagcg
acctttaggggcgcccacctccggggtcgtggccggccggtctacagtgctgtcagggca
gccctaccccagcaagctatacctacatacccaggtgtgatgtatcaggaagggttttac
ggtgcagcagacctctatggtggctatgctgcgtatcgctatgctcagccgactgctgta
gccagtcctgcaggagcagcggctgccgcagcagctgcctacagtgatggctacggacgg
gtgtacacgacagacccttaccacgctgcactaaaccctgccacagctgcagcctacggt
gtaggagctatggccacactgtacaggggaggctacagtagatttgcgccctactaa
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