Salmo trutta (river trout): 115186457
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Entry
115186457 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115186457
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115186457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
zf-RING_6
Y1_Tnp
zf-RING_5
YscO-like
Spc24
Exonuc_VII_L
LMBR1
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
115186457
NCBI-ProteinID:
XP_029601942
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEDCWDQDVLKGVYSCPQCRQT
FSPRPNLSKNNMLAELVEKLKKTGVQAAPPPALCYAGPRDVACDFCTGTRKQKALMSCLA
CLASYCETHLQSHYEFPALKRHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLMCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSEAEGVLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSFSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVEVVLPPEPKTREQLLQYSCQLTLDPNTAGTHLSLSEGNRKVTYKRQVQPYPGHP
DRFTNRYQVLCREGLTGRCYWEVEWSGGAGIGVTYKGISRRGRGEDCCLGHNDKSWSLFC
SDDIYIAKHNNNPTIIDVRPSSSHRVGVYLDWPAGTLSFYRASSDTLTHLITFTSTFIEP
LYPGFRVYYGGDSVSLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcaccatcccctgtggacacagttactgtaggagctgtattgag
gactgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagacagacc
ttcagtccgaggcctaatctgagtaaaaataacatgttggctgagctggtggagaaactg
aagaagacaggagtccaggctgctcctcctcctgctctgtgctatgctggacctagagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggca
tgtctggcctcttactgtgagactcacctccaatctcactacgaatttcctgctttgaag
aggcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgatgtgtacaatg
gacgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtgaagctgaaggagtcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtttcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggaggttgttctgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcaggcacacacctctctctg
tctgaagggaacagaaaggtgacctataaacgccaagtccaaccatatcctggtcatcca
gacagattcaccaaccggtaccaggttctgtgtagagagggtctgactgggcgctgttac
tgggaggtagagtggagtgggggggctggtataggagtgacatataaaggaatcagcagg
agaggaaggggtgaggactgttgtcttggacacaatgacaagtcctggagtctgttctgc
tctgacgacatttacattgccaagcacaataataatcccactatcatagacgtccgcccc
tccagctcccacagagtaggagtgtatctggactggccagccggcactctgtccttctat
agagcctcctctgacacactgacccacctgatcacattcacctccacattcattgagccc
ctctatccagggtttagggtttattatggtggcgactcagtgtccctgaaataa
DBGET
integrated database retrieval system
