Salmo trutta (river trout): 115186728
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Entry
115186728 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115186728
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115186728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
RING_XB3-XBAT31
zf-RING_2
Fib_alpha
ANCHR-like_BBOX
zf-RING_6
DUF8516
YscO-like
Spc24
zf-RING_5
Y1_Tnp
DUF8604
M_C
DUF8567
Motif
Other DBs
NCBI-GeneID:
115186728
NCBI-ProteinID:
XP_029602114
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRQT
FSPRPTLSKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQSHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSEAEGVLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKREWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAGTHLSLSEGNRKVTCTDQVQPYPGHP
DRFTNIVQVLCREGLSGRCYWEVEWTGYVVDTAVSYKDISRTGRGNRFGFNNKSWSLHYY
SGSYCFRHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FSLNGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcgccatcccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagacagacc
ttcagtccgaggcctacgctgagtaaaaataacatgttggctgagcttgtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggca
tgtctggcctcttactgtgagactcacctccaatctcactacgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gacgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtgaagctgaaggagtcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaagagaatggaccaagatctcc
actacagtgaatatagtggatgttgttctgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcaggcacacacctctctctg
tctgaagggaacagaaaggtgacctgtacagaccaagtccaaccatatcctggtcatcca
gacagattcaccaacatagtccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggactggttatgttgttgatacagcagtctcatataaagacattagc
agaacagggagaggtaatagatttggattcaataacaagtcctggagtttacattactat
agtggtagttattgtttcagacacaataatgttgagactaaagtatcaggccctcagtcc
tccagagtaggagtttacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
tttagtctcaatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
