Salmo trutta (river trout): 115188858
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Entry
115188858 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04340
Hedgehog signaling pathway
stru04350
TGF-beta signaling pathway
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115188858
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115188858
04350 TGF-beta signaling pathway
115188858
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115188858
04137 Mitophagy - animal
115188858
09144 Cellular community - eukaryotes
04520 Adherens junction
115188858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115188858
04121 Ubiquitin system [BR:
stru04121
]
115188858
03029 Mitochondrial biogenesis [BR:
stru03029
]
115188858
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115188858
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115188858
Autophagy
Mitophagy
Other mitophagy associated proteins
115188858
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115188858
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115188858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Ribosomal_L28
Motif
Other DBs
NCBI-GeneID:
115188858
NCBI-ProteinID:
XP_029603546
Ensembl:
ENSSTUG00000044682
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSGPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKRQGAGFLGCIRLLANTISRLKDTGYQRLELCK
LNPSDSDAVRGQIVVSLQTRDGLGSGGSVVDCRALLENEGPVFESCFSEEPLPYSDPTGA
AGGGTCPPDSPNQENRLQAQRIRGQDSQTPQNRPHGNQSPDLPEGYEQRTTVQGQVYFLH
TQTGVSTWHDPRIPRDLTSVSCEELGPLPAGWEVRSTVSGRIYFVDHNNRTTQFTDPRLH
TIISQHSQMKESSQPLGGGGGREMEVGGEEEEGGEEEVTLRYERDLVHKLKLLRHELSLQ
QPQAGHCRIEVSRDEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLC
HEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGGFTL
PFYKQLLGKPIMLQDLETTDPELHKSLVWILENDISSVLDHTFCVEHSAFGKFLQHELKP
NGQNVPVTEDNKKEYVKLYVTWRFMRGIEAQFLALQKGFSQLIPQHLLKPFDHKELELII
GGLGKIDLSDWKSNTRLKHCAVDSNVVCWFWEAVESFSEERRGRLLQFVTGSTRVPLQGF
KALQGSTGSAGPRLFTIHLIEANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETC
GFAVE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcccgggtctcggagaaacgggtccagcatcaaaatccgcctgacagtctta
tgtgccaagaaccttgcaaagaaagacttcttccggttgccggacccatttgcgaaggta
gtggtggacggatcaggccagtgtcattctacagacacagtgaagagcactctagacccc
aaatggaaccaacactatgacctgtacatagggaagacagactccatcaccatcagtgtg
tggaaccataagaagatccacaagaggcagggagccgggttcctgggctgcatacgactg
ttggccaacaccatcagcagactgaaggacacgggctaccagcggttggagctgtgtaag
ctgaatccatcagatagtgatgcagtacggggacagatcgtagtgagcctccagaccaga
gatggtttgggcagcggaggatctgtggtcgactgtagagcactgttagagaacgagggg
cctgtgtttgagagctgtttcagtgaggagccgctgccgtactcagaccccactggcgcc
gctgggggcgggacctgtccaccggattcacccaaccaggagaaccggctccaggctcag
cgaatcagaggccaggattcccaaacccctcagaaccgaccgcatggcaaccaatcacca
gatctgcctgaaggatacgagcagcgcactacggtccagggacaggtttattttctccac
acacagacgggagtcagtacctggcacgacccacgaatacccagggacctgaccagtgtg
agctgtgaggagttgggtccgctgccggccggctgggaggtgaggagcacggtgtctgga
aggatctactttgtggatcacaacaaccgaacaacgcagttcactgaccctcggctgcac
accatcatcagccaacattcccagatgaaggagtcgtctcagccgctgggtgggggaggc
gggagagagatggaggtggggggggaggaggaggaaggaggagaagaggaagtgacgctg
cgctacgagagagacctggtccacaaactgaagctgctcagacacgagctgtcgctgcag
caaccacaggctggacactgtcgcatagaggtctcacgagacgagatctttgaggagtca
tatcgtcagatcatgaagatgaggcccaaggatctgaagaagcgactgatggtgaagttt
agaggagaggaaggactggactacggaggagtggcaagggagtggctgtacctgctgtgc
catgagatgttgaacccgtactatggcctgttccagtactcaacagacaacatttacaca
ctacagatcaaccctgactcctctatcaaccctgaccacctgtcgtatttccactttgtg
ggtcgtgtgatgggcctggccgtgttccatagccactacatcaatggaggcttcaccctg
cccttctacaagcagctgctggggaaacctataatgctgcaagacctggagaccactgat
cctgaactacacaagagtctggtctggatactggagaacgacatctcgtcggttctagat
catacgttctgcgtggaacacagtgccttcgggaagttccttcaacacgagctgaaaccc
aacggtcaaaacgttccggtaaccgaggacaacaagaaggagtacgtcaagctctacgtg
acctggaggttcatgagaggcatcgaggctcagttcttagctctgcagaaaggattcagc
caactgattcctcaacacctcctcaaaccgtttgaccacaaggagctggagttgataatc
ggaggcctggggaagatagacctatcagattggaagtctaacacccgtttgaagcactgt
gctgtggacagtaatgtggtttgctggttctgggaggctgtggagagcttcagtgaggag
aggagaggacgactactgcagtttgttactggttctaccagagttccactacagggattc
aaggcactacagggttctacaggttcagcaggcccaaggctgttcaccatccatctgata
gaggccaacacagacaacctacccaaggcacacacatgttttaacagaatagatatccct
ccctacgagtcgtacgagaaactttatgagaaactgctgacggccgtggaggaaacttgc
ggcttcgctgtggagtga
DBGET
integrated database retrieval system
