Salmo trutta (river trout): 115191419
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Entry
115191419 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115191419
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115191419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Fib_alpha
Spc24
YscO-like
DUF6175
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
115191419
NCBI-ProteinID:
XP_029605134
Ensembl:
ENSSTUG00000028823
LinkDB
All DBs
Position
4:68686305..68693484
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AA seq
552 aa
AA seq
DB search
MAQQGVLLDQDQFCCSICLDLLKEPVTTACGHSYCRSCIEGCWDQDVLKGVYSCPHCRET
FTPRPILRKNNMLAEVVDKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQSHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYQCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKNLQKAVKSLKRSAQAAVKD
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIYFLQSYQSLSSISVSSDLPSIVVHPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSKGNRKVTCTRKVQSYPDHP
DRFTNYIYQVLCREGQSGRCYWEVEWSGDVDTAVSYKDISRTETGNRFGYNYKSWSLKCS
SDGYCFRHNNVLSKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FNLYGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgctccatctgtctggat
ctactgaaggagccggtcactactgcctgtggacacagttactgtagaagctgtattgag
ggctgctgggatcaggatgttctgaaaggtgtctatagctgtcctcattgcagagagacc
ttcactccaaggcctattctgaggaaaaataacatgttggctgaggtggtggacaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtctagcctcttactgtgagactcacctccaatctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatcagtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aagaatctccaaaaagctgtgaagtctctcaagcgctctgcacaggcagcagtgaaggat
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatctatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccatcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctaaagggaacagaaaggtgacctgtacacgcaaagtccaatcatatcctgaccatcca
gacagattcaccaactacatctaccaggttctgtgtagagagggtcagtctggacgctgt
tactgggaggtggagtggagtggtgatgttgatacagcagtctcatataaagacatcagc
agaacagagacaggtaatagatttggatacaattacaagtcctggagtttaaagtgctct
agtgatggttattgtttcagacacaataatgttctgtctaaagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctgga
tttaatctctatggtactgctgagctggttaaactgtag
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integrated database retrieval system
