Salmo trutta (river trout): 115191428
Help
Entry
115191428 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115191428
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115191428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_6
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
Prok-RING_4
YscO-like
Spectrin_1st_PEPL
DUF8516
Wtap
Y1_Tnp
Fib_alpha
GPG1
Motif
Other DBs
NCBI-GeneID:
115191428
NCBI-ProteinID:
XP_029605139
UniProt:
A0A674B225
LinkDB
All DBs
Position
4:68264528..68279689
Genome browser
AA seq
551 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVVIPCGHSYCRSCIEDCWDQDVLKGVYSCPQCRET
FTPRPTLRKNNMLAEVVEKLKKTGVQAAPPPALCYAGPGDVVCDVCTGTRKQKALMSCLV
CLASYCETHLQSHYESPALKKHKLVKATAQLQEKICSDHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRLQEREKELKELQQAVESFKRSAHAAVED
SDKIFTELIRSIERRSSEVKELIRAQEKAQVSKAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVLLPPEPKTREQLLQYSCQLTLDPNTAHRHLSLSKGNRKMTNTDQVQPYPDHP
DRFTNYRQVLCREGLSGRCYWEVEWSGDVYTAVSYKDISRKGSDNIFGFNNKSWSLQYYS
GGYWFRHNNAVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLFHRVQTTFTQPLYPGF
WLNGTAELVKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgctgttctgtctgtctggat
ctactgaaggagccggtggttattccctgtggacacagttactgtaggagctgtattgag
gactgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctactctgaggaaaaataacatgttggctgaggtggtggagaaactg
aagaagacaggagtccaggctgctcccccacctgctctgtgctatgctggacctggagat
gtggtgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaatcgcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctgatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgctatctgtgtacaatg
gatgaacataaaggccacgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagactccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacatgcagcagtggaggac
agtgataagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtaaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttttactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacagacacctctctctg
tctaaagggaacagaaagatgaccaatacagaccaagtccaaccatatcctgaccatcca
gacagattcaccaactacaggcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggtgatgtttatacagcagtctcatataaagacatcagcaga
aaagggtcagataatatatttggattcaataacaagtcctggagtttacagtactatagt
ggtggttattggttcagacacaataatgctgtgactaaagtatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcttccacagagtccagaccacattcactcagcccctctatcctgggttt
tggctcaatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
