Salmo trutta (river trout): 115191463
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Entry
115191463 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115191463
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115191463
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
YscO-like
Y1_Tnp
Fib_alpha
DUF4407
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
115191463
NCBI-ProteinID:
XP_029605170
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Position
4:68170755..68182351
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AA seq
552 aa
AA seq
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MAQQGVLLYQDQFCCSVCLDLLKEPVTIPCGHNYCRSCIEGCWDQDVLKRVYSCPQCRET
FTPRPNLRKNNMLADMVAELKKTGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLV
CLASYCETHLQPHYESPALKKHKLVKATSQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSPAAERNEKQRQLGMSQQKVQQRFQEREKDLKELQQAVESFKRSAQAAVEA
SDQIFTELIRSIEGRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGYVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPKPKTREQLLQYFCQLTLDPNTACTYLSLSEGNRKVTYTDQVQPYPDHQ
DRFTNYCQVLCREGLSGRCYWEVEWSGEWVYTAVSYKDISRTERGGGFGYNNKSWSLQYN
RGGYCFRHNIVETEVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FNIYGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctgtaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcaccatcccctgtggacacaattactgtagaagctgtattgag
ggctgctgggatcaggatgttttgaaaagggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgatatggtggcggaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcatgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttgaag
aaacacaagctggtcaaagccacctcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatttgtgtacaatg
gatgagcataaaggccatgatacagtgtcacctgcagcagagaggaatgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggatctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggcc
agtgatcagatctttactgagctaatccgctccattgagggaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggatatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttcctgaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccaaagcccaagaccagagaacagttg
ttacaatatttctgtcaactcacactggacccaaacacagcatgcacatacctctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctgaccatcaa
gacagattcaccaactactgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggagtgggtttatacagcagtctcatataaagacatcagc
agaacagagagaggtggtggatttggatacaataacaagtcttggagtttacagtacaat
agaggtggttattgtttcagacacaatatcgttgagactgaagtgtcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
tttaatatctatggtactgctgagctggttaaactgtag
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