Salmo trutta (river trout): 115192789
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Entry
115192789 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115192789
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115192789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
zf-RING_5
Fib_alpha
Prok-RING_4
Y1_Tnp
MAP65_ASE1
YscO-like
Spc24
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
115192789
NCBI-ProteinID:
XP_029607506
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All DBs
Position
4:complement(61741241..61752539)
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AA seq
554 aa
AA seq
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MAQQAVLLDQDQFCCSVCLDLLKEPITIPCGHSYCRSCIEGCWDQDVLKGYSCPQCRQTF
TPRPTLRKNNMLAEVVEKLKKTGIQAAPPPTLCYAESVDVVCDSCTGTRKQKALMSCLAC
LASYCDTHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICMLCTMD
EHKGHDTVSAAAERTEKQRQLGMSQQKIQQRFQEREKELKELQQAVESLKHSAQAAVEDS
DKIFTELIRSIERRRSEVKELIRAHEKAQVSQAEGLLEQVEQEIAELKKRSTELEQLSHT
EDHVHFLQSYPSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWNKIST
TVNIVDVVLPQEAKTREQFLQYSCQLTLDLNTAHTHLSLSAGNRKVTYTSQVQPYPDHPD
RFTNDLMVLCREGLSGRCYWEVEWSGRWVIIAVSYKDIRRTGRGNAFGLNDKSWSLQCSS
GSYCFRHNHVVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGV
WLNSDNGSAELVKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaggcagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggaaccaatcaccatcccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggctatagctgtcctcagtgcagacagaccttc
actccaaggcctactctgaggaaaaataacatgttggctgaggtggtggagaaactgaag
aagacaggaatccaggctgctccccctcctactctgtgctatgctgaatctgtagatgtg
gtgtgtgattcctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcatgt
ctggcctcttactgtgatactcacctccaacctcactatgaatctcctgctttcaagaag
cacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgacaaa
ctgctggaggtttactgtcgtaccgatcagcagtgtatctgtatgctgtgtacaatggat
gaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagaggcag
ctggggatgagtcagcagaagatccagcagagattccaggagagagagaaggagctgaag
gagctccaacaggctgtggagtctctcaagcactctgcacaggcagcagtggaggacagt
gataagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaaggag
ctgatcagagcccatgagaaggctcaagtgagtcaagctgaaggacttctggaacaagtg
gaacaggagatagctgagctgaagaagagaagcactgagctggagcagctctcacacaca
gaggatcacgtccatttcctccagagttatccgtctctctccagtatcagtgtatcttca
gacttaccaagcatcgttgtccgtccgcttcagtactttggagatgtgagtaagactgtg
tctgaactgcgagagaaactagaagacttccttaaaggagaatggaacaagatctccact
acagtgaatatagtggatgttgtactgcctcaagaggccaagaccagagaacagttctta
caatattcctgtcagctcacactggacctaaacacagcacacacacacctctctctgtct
gcagggaacagaaaggtgacctatacaagccaagtccaaccatatcctgaccatccagac
agattcacaaatgacttgatggtgctgtgtagagagggtctgtctggacgctgttactgg
gaggtggagtggagtggacggtgggttattatagcagtctcatataaagacatcaggaga
acagggagaggtaatgcatttggattgaatgacaagtcctggagtttacagtgctctagt
ggtagttattgtttcagacacaatcatgttgtgactaaagtatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggggtt
tggctcaatagtgataatggttctgctgagctggttaaactgtag
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