Salmo trutta (river trout): 115193078
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Entry
115193078 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115193078
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115193078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
U-box
zf-C3HC4_3
zf-RING_2
Fib_alpha
zf-RING_5
zf-RING_6
YscO-like
Y1_Tnp
Fuz_longin_3
U3snoRNP10
TRAF3_RING
DUF1116
Motif
Other DBs
NCBI-GeneID:
115193078
NCBI-ProteinID:
XP_029607923
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All DBs
Position
4:68311887..68319455
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AA seq
539 aa
AA seq
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MAEQGVLLDQDQFCCSVCLDLLKEPVTTACGHNYCRSCIEGCWDQDVLKGVYSCPQCRET
FTPKPNLRKNNMLAEVVEKLKKTGPQAAPPPALCYAGPGDVVCDVCTGTRKQKALMSCLV
CLASYCETHLQSHYESPALKKHKLVKAIAQLQEKICSHHDKLLEVYCRTDQQCICLLCVK
DEHKGHDTVSAAAERTEKQRQLGMSEQKVQQRFQEREKELKELQQAVESFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSYLSYKSLSSISVSSDLPSIVVRPLQYFEDVSKTVSELREKLEDFLKG
EWTKISTTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTYLSLTEGNRKATNSRQVQ
PYPHHPDRFTNYSQVLCREGLSGRCYWEVVWSGDRVYTAVSYKDISTTGHLFGLNNNSWS
LQCCRGGYCFIHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQNMQQH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagggagtactgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcttgtggacataattactgtagaagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaagcctaatctgaggaaaaataacatgttggctgaggtggtggagaaactg
aagaagacaggaccccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggtgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaatcgcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccatcgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgaaa
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtgagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatatttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcaatcttatttaagttataagtctctc
tccagtatcagtgtatcttcagacttacccagcatcgttgtccgtcctcttcagtacttt
gaagatgtgagtaagactgtgtctgaactgagagagaaactagaagacttccttaaagga
gaatggaccaagatctccactacagtaaatatagtggatgttgtactgcctccagagccc
aagaccagagaacagttgttacaatattcctgtcagctcacactggacccaaacacagca
cacacatacctctctctgactgaagggaacagaaaggcgaccaattcacgccaagtccaa
ccatatcctcaccatccagacagattcaccaactacagtcaggttctgtgtagagagggt
ctgtctggacgctgttactgggaggtagtgtggagtggagacagggtttatacagcagtc
tcatataaagacatcagcacaacaggtcatttatttggactcaataacaattcctggagt
ttacaatgctgtagaggtggttattgtttcatacacaataatgttgagactaaagtatca
ggccctcagtcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttc
tacagtgtctctgacacaatgaccctcctccacagagtccagaacatgcagcaacattaa
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