Salmo trutta (river trout): 115193844
Help
Entry
115193844 CDS
T08542
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115193844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115193844
Membrane trafficking [BR:
stru04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115193844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
115193844
NCBI-ProteinID:
XP_029608777
Ensembl:
ENSSTUG00000004539
LinkDB
All DBs
Position
5:21165862..21240550
Genome browser
AA seq
1912 aa
AA seq
DB search
MVDKNIYIVQGEIITVVSAIKRNSRWNTHTPLDEEQDPLLSSFSHLKETLNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEVRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKIPSCILDTQDLICAEQPINTNQRGLER
AYNILWKNKRVQLKMRAGGMSESSKWKKQKRLPRPPHHMVRSASGGLEQAPPTTLSNNNL
TGGVLFIEQVSLSVPDSMASSMSSPTDSGLDTCSKATSREDLTDLDQSSSVATTPGTATS
PSTEPGRLDAQSEGRQVDRAQSASVESIPEVLEDRDSVTEQSDSASIHDMDYVNPRGVRF
TPQQTQRDGEDGAALIPYGLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQLLTVALEAA
HIAPYQSLLGLVKDELCRHLFQLLNVDRMNLCTASIRACFLLFESMRGHLKFQLEMYLKR
LMDIITSENMKMPYEMKEMALEALVQLWRIPSFVTELYINHDCDFYCSNLFEDLTKLLSK
NAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSTAQQDQSAETVLAEGEGSTNDR
GDTTTEAGRQVNSANGQNVPEADSVPLPPTSGHLMAEKMRLGRQDQEETEPSAEKKEPTK
PQRFSSCLPDSQELLDIRNKKKLLNSGTEQFNQKPKKGIQFLQEKGLLSSPMDNNEVAQW
LRENPRLDKKQIGEFISDRKHMELLDSFVNTFTFQGLRIDEALRLYLEAFRLPGEAPVIH
RLLETFTDTWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNNNVRKQNIPMTVEQFKKNLK
GVNGNTDFDQDMLEDIYNAIKNDEIVMPDEQSGLVKENYVWSVLLHRGATSEGVFLHVPA
GSYDHDLFTMTWGPTIAALSYVFDKSLDDAIIQKAIAGFRKCAMISAHYGFSDVFDNLII
SLCKFTTLSSESAENLPTVFGSNGKAQVAAKTVFHLAHRHGDILREGWKNIMDSMLQLFR
AELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGLRGPSTE
NQEAKQAAMLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEM
LLRIVMENRDRVSCVWQTVRDHLCHLCVQASESCFLVERAVVGLIRLAIRLLRREDISSQ
VLLSLRLLLMMKPHVLARVSREVAYGLHELLKTNAANIHCTDDWFTLFSLIECIGAGIKP
PASFQVTSTSPDIDTGAQSDSELSSHHHSEVSLDRGYTSDSEVYTEHGKSRMPRSVTDVD
VASSGWLVVGKDDLDINKVPASGSKPLLNPLVNQYSLTLGQDMGFHDTKSLIKCVESLSF
IVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTHEKKKNHKYDSQKSRVRRKPREKEGA
SRRAKASSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAQE
QRHLEVAGKKIEADSQTLWTSCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQT
LDAVEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPT
FAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSVDSRTGYSDLWEI
TWERINCFLPNLREELFKQTVIPQPDPAPSPPVELAQPAAPSPPASPPPAQAPSPVPAAP
TEPKTSSRPASPQDPPPPSANGTDRSSPVPPSTPPMPTPVKMSPQISTPLSHSHMSQSPL
ILQPLASHLQVGGVPPMSLPIILNPALIEASSPVPLLPAPRPTDLSDTPEVK
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaagaatatatacattgtccaaggggagattattactgttgtaagtgccatc
aagaggaattcaaggtggaatacccacactcctttggatgaagaacaagatccattgctt
agcagcttcagccacctgaaggagactctcaacaatataaaagagctgtcagatgtggag
cctaatgtattcctgcggcccttcctggaggtggtacgatctgaagacaccaccggacca
atcacaggcttggccctcacctctgtcaacaagttcctgtcctatggcctcatagatgct
aaccatgaggcggcagcggaggccattgagaacatggcagacgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtggtgctcatgaaaatcctacaggtcctg
aggaccttgctgctcacgcccgtcggtgcccacctgaccaacgagtctgtgtgcgagatc
atgcagtcgtgtttccgcatctgcttcgaggtgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtagacatggtgcagctgctgttctccagactaccccaatttaaa
gaggaggccaaaagttttgtgggtgctaacatgaagaagatcccatcctgtatcctggac
acacaggatcttatttgtgcagaacagcctataaacaccaatcagaggggcttagagagg
gcttacaatatcttgtggaaaaacaaacgagtgcagctgaagatgcgtgctggtgggatg
agcgagtcatcaaagtggaagaagcagaagcgcttgccccggcccccccatcacatggta
cgaagcgcctcgggcggattggagcaggcccctcccaccacccttagcaacaacaacctc
actggtggtgtccttttcatcgagcaggttagtttgtctgtcccagacagcatggcctct
tccatgtctagccccacagacagcggcctggacacttgctccaaggccacctccagagag
gacctgacagacctggaccagagcagctctgtcgccaccaccccaggcacagcaactagc
ccttccacagagcctggacgcctggatgctcagtctgaggggaggcaggtggatcgtgcc
cagtcagcttcggtggagtccatccctgaggtcctggaggacagagactctgtgacggag
cagtcagactcagcctcaatacacgacatggattacgtcaacccccgaggagtccgcttc
acaccacagcaaacacagagagacggtgaggatggtgcggctctcatcccctacggtctg
ccctgtctgcgggagctcttccgcttcctcatctcgctgactaacccccatgaccgccac
aacacggatgccatgatgcacatgggcctgcagctgctgactgtggctctggaagcagcc
cacattgccccctaccagtcactgctgggtctggtcaaagacgagctctgcagacacctc
ttccagttgctcaatgtggaccgtatgaacctgtgcaccgcctccatccgagcctgcttc
ttgctctttgagagcatgcgaggacatttgaagtttcagcttgagatgtatctgaagagg
ctgatggacatcatcacgtcagagaacatgaagatgccttatgagatgaaggagatggcc
ctggaggccctggtgcagctctggaggatccccagcttcgtcaccgagctctacatcaac
cacgactgtgacttctactgctcaaacctgtttgaagacctcaccaagctgctctccaag
aatgccttccctgtgtccggacagctctacacaactcacctcctctcactagaggcccta
ctgactgttattgacagcaccgaggcccactgccaggctaaggtgctcaacagcacagct
cagcaggaccaatcagcagaaactgtgttggcggaaggggagggctcaaccaatgaccgt
ggagacacaaccacagaagcaggcaggcaggtgaacagtgccaatggtcagaatgttcca
gaggctgacagcgtgccccttccacctaccagcgggcacctaatggcagagaagatgaga
ctgggcagacaagaccaggaggagacagaaccatctgctgagaagaaagaaccgacaaag
cctcaacgcttctcgtcttgtttacctgattctcaagagctgttggacatcagaaataaa
aagaagctgctgaacagtggcacagagcagttcaaccagaagcctaagaaaggcatccag
ttcctgcaggagaagggtctcctcagcagccccatggacaacaacgaggtggcccagtgg
ctccgggagaacccccgcctcgacaagaagcagatcggagagttcatcagtgaccgcaag
cacatggagctactggacagcttcgtcaacacgttcactttccaaggactgcgtattgac
gaggcgctgcgtctgtatctcgaggccttcagactgccaggagaggctccggtcatccat
cgacttttggaaaccttcacagacacctggcataaagtgaacggctctcccttcatgacc
aacgacgccggcttcgccctggcctacgctgtcatcatgctcaacacggaccagcacaac
aacaacgtgcgcaagcagaacatccccatgactgttgagcaattcaagaagaatctgaag
ggtgtgaatggaaatacagacttcgatcaggatatgctggaggacatctacaatgcaatc
aagaatgacgagattgtgatgccagacgagcagtcaggcctggtgaaagagaattacgtg
tggagcgtgttgctccaccggggggccacctccgagggggtcttcctccatgtgcccgcc
ggcagctacgaccacgacctgttcaccatgacctgggggcccaccatcgccgccctctcc
tacgtcttcgacaagagcctggatgacgccatcatccagaaggccatcgctggcttccgg
aaatgtgccatgatatcagctcattatggattcagtgacgtgtttgataatttgatcatc
tccctctgcaagtttacaacgctcagcagcgagtcggcggagaacctgcccacagtgttt
gggagtaatgggaaggcccaggtagctgctaagaccgtgttccacctggcccaccggcac
ggtgacatcctgagggagggctggaagaacatcatggactccatgctgcagctgttcaga
gctgagctgctgcccaaggccatggtggaggtggaggattttgtggagccaaatggaaag
atttcacttcaaagagaagagacgccttcaaatcggggcgagtctgcggtgctgagcttt
gtgaactggctgactctgagtggagcggagcagtctggtctacgtgggccctctactgag
aaccaggaggccaagcaggcagccatgctctgtatcaagcaatgtgacccagagaagctg
atcacagagagtaaattcctgcagctggagtctctacaggagctgatgaaggctctgatc
tcagtcacacctgatgaggagacgtatgatgaggaggacgcggctttctgcctggagatg
ctgctacgcatcgtcatggagaacagggaccgcgtgtcgtgtgtatggcagacggtgcgg
gaccacctgtgccacttgtgtgtccaggcttcagagagctgcttcttggtggagagggcc
gtggtgggcctcatcagactggccatccgcctgctgcgcagagaggacatcagctcacag
gtgctgctgtccctgcgtctcctgctgatgatgaaaccacacgtcctggcccgggttagc
cgggaggtggcctacggcctccatgagctgctcaagaccaacgctgccaacatccactgc
acagacgactggttcaccctcttctccctaatcgagtgcatcggggccgggatcaaaccg
cccgcctccttccaggtcacctccaccagtcccgacatcgacacaggtgcccagtcagac
agtgagctgtcgtcccaccaccacagtgaggtgagtctggaccggggctacacctccgac
tctgaggtctacacggagcacggaaagtccaggatgccccgctctgtcactgacgtggac
gtggccagcagcggatggcttgtggttggtaaagatgacctggacatcaacaaggtaccg
gcctctggctccaagcccctgctcaaccctctagtgaaccagtacagcctgacactgggc
caagacatgggcttccacgacaccaagtccctcatcaagtgtgtggagtccctctccttc
atagtacgcgatgctgcacatgtcacccctgaaaactttgagctgtgtgtcaaggccatc
cgggtgtttgtggaggccagccttaacggaggctacaggacccatgagaagaagaagaac
cacaagtatgactcccagaagtcccgtgtgaggaggaagcctcgggagaaagagggggca
tcccgccgcgccaaggcctccagccagaggccctcccgttcccatagcgacgacgaggag
gacgagggagtcccggccagctaccacacggtgtcattacaggttagtcaggacctgtta
gacctgatgcacacgctgcacacgagggccgccagcatctacagctcctgggcacaggaa
cagcgccacttggaggtcgcagggaagaagattgaggctgactcccagacactgtggacc
agctgctggtgcccacttctgcaagggatagcctggctgtgctgtgatgccaggcggcag
gtgcgaatgcaggccctgacctacctccagagggcactgttggttcatgacctgcagaca
ctagatgctgtggagtgggagtcctgcttcaacaaggtcctgttccccctgctgaccaag
ctgctggacaatattagccctgcagatgtgggaggcatggaggagaccaggatgagggcc
tgcaccctgctgtcaaaggtgttcctgcagcacctctctcccctgttgtctctgcccacc
tttgctgccctgtggctcaccatcctggacttcatggacaagtacatgcacgctggctcc
agtgacctactgctggaagccattccagagtctctgaagaacatgctgctggtgatggac
acagcaggaatcttccacagcgttgactcccgtacgggatactctgacctgtgggagatc
acctgggaacgcatcaactgcttcctgcctaatctccgggaagagctcttcaaacagaca
gtcataccccaaccagatcctgctcccagtcccccagtggaacttgcccagccggctgcc
ccctcccccccagcctcgccacccccagcccaggccccatctccagtgccagctgccccc
acagagccaaagacctccagcagaccagcgtcgccccaagatcccccaccacctagtgcc
aacggaactgacagatcatctccagtgcccccgtcaactccccccatgcccaccccagtg
aagatgtccccccagatctctacccccctgagtcactcccacatgagtcagtcccccctc
atcctgcagcccctggcctcccatctgcaggtggggggcgtgccccccatgtccctcccc
atcatcctcaaccccgccctcattgaggccagctcccctgtccccctgctccctgccccc
aggcccaccgaccttagtgacaccccggaggtaaaatag
DBGET
integrated database retrieval system
