Salmo trutta (river trout): 115195780
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Entry
115195780 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115195780
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115195780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
MAP65_ASE1
zf-RING_6
Prok-RING_4
CCDC22_CC
Fib_alpha
zf-RING_5
Y1_Tnp
Gp58
Exonuc_VII_L
Tli4_N
LMBR1
Motif
Other DBs
NCBI-GeneID:
115195780
NCBI-ProteinID:
XP_029611877
Ensembl:
ENSSTUG00000038665
LinkDB
All DBs
Position
6:27354266..27358209
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AA seq
556 aa
AA seq
DB search
MAQQAVLLDQDQFCCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRQT
FTPRPDLRKNNMLAEVVEKLKKTGLQAAPPDLCYAGPGDVACDFCTGTRKQKALMSCLMC
LVSFCKTHLQPHYSVPGLKKHKLVKASTQLQENICSRHDELLKIYCRTDQNCICCLCMVD
DHKGHDTVSAAAERTEKQSQLGMSQQNLQQRIQEREKELKELQQAVESLKRSAQAAVEDS
DRIFTELIHSIERRRSEVKELIRDQEKAQVSQADGLLEQLEQEIAELRRRNAELEQLSHT
EDHIHFLQSYQSLSSPSVSSDLHSIVIHPQCFGDVNKAVSDVREKLEDVLKGEWTKISTT
VISVDVLLPPEPKTREQFLQYSCQLTLDPSTAHKFLSLSEGNRKVTVVKNVKDPNPDQPD
RFTDWWQVLCREGLSGRCYWEVEFHRGTGFIAVSYKDISRIGKVNDSRFGYNDKSWGLEC
SSNGYSFRHNNVDTKVSGPQSSRVGVYLDHKAGILSFYSVSDTMTLLHTVKTTFTKPLYP
GIWIRSVNDSAELCKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaggcagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccagtagctattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaagggggtctacagctgtcctcagtgcagacagacc
ttcactccaaggcctgatctgagaaaaaataacatgttggctgaagtggtggagaaactg
aagaagacaggacttcaggctgctccccctgatctgtgctatgctggacctggagatgtg
gcatgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctgatgtgt
ctggtgtctttctgcaagactcacctccagcctcactatagtgtccctggactaaagaag
cacaagctggtcaaagcctccacacagctacaggagaacatctgctcccgtcatgacgaa
ctgctaaagatttactgtcgtaccgatcagaattgtatctgttgtctgtgtatggtggat
gatcataaaggccacgatacagtgtcagctgcagcggagaggacagagaaacagagtcag
ctggggatgagtcagcagaatctccagcagagaatccaggagagagagaaggagctgaag
gagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggaggacagt
gataggatctttactgagctgatccactccattgagagaaggcgttctgaggtgaaggag
ttgatcagagaccaggagaaggctcaagtgagtcaagctgatggactcctggagcaactg
gagcaggagatagctgagctgaggaggagaaacgctgagctggagcagctctcacacaca
gaggatcacatccatttcctccagagttatcagtctctctccagtcccagtgtctcttca
gacttacacagcatcgttatccatcctcagtgctttggagatgtgaataaggctgtttct
gatgtcagagagaaactagaagacgttcttaaaggagaatggaccaagatctccaccaca
gtgatttcagtggatgttttactgcctccagagcccaagactagagaacagttcttacaa
tattcctgtcagctcacactggacccaagcacagcacataaattcctctctctgtctgag
gggaacagaaaggtgacagttgttaagaatgttaaagatcctaatcctgatcaaccagac
agattcactgattggtggcaggtgctgtgtagagagggtctgtctggtcgctgttactgg
gaggtggagtttcatcgtgggactggttttatagcagtctcatataaagacatcagtaga
atagggaaggttaatgattccagatttggatacaatgacaagtcttggggtttagagtgc
tctagtaatggttatagttttagacacaataatgttgacactaaagtgtcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtattctgtccttctacagcgtc
tctgacacaatgaccctcctccacacagtcaaaaccacgttcactaaacccctctatcct
gggatatggattaggtccgtaaatgattctgctgagctgtgtaaactgtag
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integrated database retrieval system
