Salmo trutta (river trout): 115197064
Help
Entry
115197064 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115197064
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115197064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
Not3
ACCA
KorB
Motif
Other DBs
NCBI-GeneID:
115197064
NCBI-ProteinID:
XP_029614096
LinkDB
All DBs
Position
7:complement(18704526..18711801)
Genome browser
AA seq
640 aa
AA seq
DB search
MLTVCILLVHCLLLAAPTHQGDVLYLTNMDSDALCWPDTDLMDPSQIQAKSQFSISLEAT
PTAQNKPLKRGNDLSFDSAAQSDRVCFTMAEAVLDNDLMTCSICLDLLKDPVTTACGHSY
CMGCIKESWDQDDRKGVYSCPQCRQTFTPRPALGKNTLLNELVEKLKKTGLQAAPPAYCY
AGPSDVGCDICAGRKLKAVKSCLLCLASYCETHLKLHNDLNQGKKHKLIDATGLQEKICN
RHDKLLEVYCRTDQQCICLLCVMDDHKGHDIVPAAEERTEKQKQLGENSLKSQQRIQERE
KEMQELRQAVDSLKRSAQAELFDSERTLTELIHSVEKRRSEVKELISAQEKAQVGRAKRH
MRQLEQEVAGLRRRAAELKHLSHTDDHIHFLQHFQSLCVPLGSEGTPSIIVTFKHVKKFA
AELQERLQDLCKVQMDRIYGKVAKVPNVHLPEPKTREEFLEYCCPLTLDPNTANQLLCLS
EWNRKVTRSHTIQAYPNHEHRFSHWKQVLCREGVWSISEPCYWEVEWTGVEVDVAVSYKG
ISRRGSGYECWFGANDKSWRLYCSASRCCFYHNGKETSVPAIRSDSRVGVYLDHGAGTLS
FYSVTVSDTMTLLHRVETTFSQPLYPGFGVGSSVRILTPF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgactgtctgtattctgttagtacattgtctattgctggcagcgcctactcaccaa
ggcgacgtactgtacttgacgaatatggattctgatgccctctgctggccagacactgat
cttatggatccctcacagatccaggccaaaagccaattttcgatttcactggaagccaca
cctaccgcccagaacaaaccgttaaagcggggaaacgatttatcttttgactctgctgct
cagtctgatagggtgtgttttaccatggcagaagctgttttagataatgatttgatgacc
tgttcaatctgtctggacctactgaaagatccagtgactactgcctgtggacacagttac
tgtatgggctgtattaaagaaagctgggatcaggatgatcggaaaggtgtgtacagctgt
ccccagtgcaggcagaccttcaccccaagacctgctctggggaaaaatactctactgaac
gaattagtggagaaactgaagaagacaggactccaagctgctcctcctgcttactgttat
gctggaccttcagatgtggggtgtgacatctgcgctgggagaaaactcaaagctgtcaag
tcctgtctgctgtgccttgcctcttactgtgagactcacctaaaacttcacaatgacctc
aaccaaggaaaaaaacacaagttgattgatgccactggtctacaggagaagatttgcaat
cgccatgacaaactgctggaggtttactgccgtaccgatcagcagtgtatctgtctgctg
tgtgtgatggatgatcataaaggccatgatatagtccccgctgcagaagaaaggactgaa
aaacagaagcagttgggggaaaatagtctgaaatcccagcagagaatccaggagagagag
aaggaaatgcaggagctgagacaggctgtggactctctgaagcgctctgcacaagcggaa
ttgtttgacagtgagaggaccttgactgagctcatccactccgttgagaaaaggcgctct
gaggtgaaggagctgatcagtgcccaagagaaggctcaagtgggtcgagctaaaaggcat
atgaggcaacttgagcaggaggtcgctggactgaggaggagagctgctgagctaaagcac
ctgtcacacacagacgatcacatccatttcctccagcatttccagtctctctgtgtccct
cttggatctgagggcacacccagcatcattgtcacatttaagcatgtgaagaaatttgcc
gctgaactgcaagagcgactacaagacctctgcaaggtgcaaatggacagaatatacggg
aaagtggctaaagttccaaatgttcaccttcctgagcccaagaccagagaggagttctta
gaatactgctgcccgctgacattggatcccaacacagcaaatcaactcctgtgtctgtct
gagtggaacagaaaggtgaccaggagccatacgatccaggcctatcccaaccatgaacat
agatttagccactggaaacaggtgttgtgtagagagggtgtctggagtatttctgaaccc
tgctactgggaggtagagtggactggggtggaggttgatgtagctgtctcgtataaaggg
atcagcaggagaggaagtggttatgagtgttggtttggcgctaatgacaagtcctggagg
ttgtactgctctgcatctagatgctgtttctaccataatggtaaagagacttctgtccct
gccatccgctcagactccagagttggagtgtacttggaccacggggcaggaactctgtcc
ttttacagcgtgaccgtctcagacaccatgacgctccttcacagagtcgagaccacattc
tctcagcccctctaccctgggtttggggttggttcgtctgtgaggatactaacaccattt
tga
DBGET
integrated database retrieval system
