Salmo trutta (river trout): 115205060
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Entry
115205060 CDS
T08542
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115205060
03015 mRNA surveillance pathway
115205060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205060
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115205060
mRNA cycle factors
P-body specific factors
115205060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
115205060
NCBI-ProteinID:
XP_029626496
Ensembl:
ENSSTUG00000002047
LinkDB
All DBs
Position
13:complement(3078945..3083776)
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AA seq
456 aa
AA seq
DB search
MKDDKENTRQREKRMEIKCENIEKTEKPKQEKKELMTKIIIRRLPPSITKEELEVQLQPL
PEVDYLEFFSNDSSMYPHVFARAYINFKIQEDIVLFRDRFDGYVFVDNGGQEYPAIVEFA
PFQKIAKRRSKKKDVKSGTIDEDADYKKFLEIYNGDDEKFTSTPETLLEEIEAKTKELVA
KKMTPLLDFLKNKQRIREEKREERRRRELDRKRLRDEERRRWREEDRRKRNEAEKFKKGD
KPSEKDKDQAKEVPKIKLLRKPDRGDDVEKPKEKLKKPEKDKMKDDRAPGCPDMTKRQNF
ETREDRVSQKADEDGHKDFRERDVERDRNRERDKERERRQKEKERIRRQDEDRRRRRERH
DGENSYRKREEEGKKKKGDRVWEKRRGENAGDSASHTDKPKKSEETLREEKAKRDCLRNK
DRPTIQLYQPGARNRGGESHAGERKLERDQEKGVEG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgataaggaaaacactcgtcagagggagaaaaggatggagataaaatgcgaa
aacattgaaaaaacggagaagccaaagcaggagaagaaagaattaatgaccaagatcatt
atccgacgtctgcctccaagcataaccaaggaggaactggaggtgcaattgcagccactt
ccagaagtggactacttagaatttttctccaatgacagcagcatgtacccccatgtcttc
gccagagcatacatcaacttcaagattcaggaagatattgtacttttcagagaccggttt
gatggatatgtgttcgttgataatggagggcaggagtatccagccattgttgaatttgct
ccttttcaaaagattgccaaaagaaggagtaagaaaaaggatgttaaaagtggaacaata
gatgaagatgctgactataagaaattcctggagatttataatggcgacgatgaaaagttt
acatccacccctgagactctactggaggaaatagaggcgaaaacaaaggaactagtagct
aagaaaatgactcccctcttggacttcttaaagaacaaacagagaatccgtgaggaaaag
agagaggaaaggaggagacgagaactcgaccgtaagcgcctgagggacgaggaacgtcgc
aggtggagggaggaggacaggagaaagcgcaacgaagcagagaagttcaagaaaggagac
aaaccttccgagaaggataaagaccaagcgaaggaggtgccaaaaatcaagctcttgcga
aaaccagacagaggagatgatgtggagaagcctaaagagaagttaaagaaacctgagaag
gacaagatgaaagatgacagagctccagggtgtcctgatatgacaaaacgccaaaacttc
gaaaccagggaggatagggtatcgcagaaagctgatgaagatggacacaaagacttcaga
gagcgtgacgtagaaagggacagaaaccgtgaacgagacaaggagagggagcggcggcag
aaagagaaggagcgcatcagacgacaagacgaggatcgacgaaggaggagggaaaggcac
gatggagagaactcctacagaaagcgagaggaagaagggaaaaagaagaaaggagatcgt
gtctgggaaaagagaaggggcgagaatgccggggactccgcaagccatactgataagcct
aaaaagtcggaagaaaccctgagggaggagaaagctaaaagagattgtttaagaaacaag
gatcggcctaccattcagctataccagccaggtgccaggaaccgaggaggagaatctcat
gctggggagcggaagttggagcgagaccaagaaaagggagttgaaggataa
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