Salmo trutta (river trout): 115205168
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Entry
115205168 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115205168
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
115205168
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IKI3
TPR_9
Motif
Other DBs
NCBI-GeneID:
115205168
NCBI-ProteinID:
XP_029626730
Ensembl:
ENSSTUG00000016174
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All DBs
Position
13:complement(10896074..10906504)
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AA seq
1340 aa
AA seq
DB search
MRNLRLLKSHRCLKLQGPGTPQCFTVRTDTGTVLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTIVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKDFEPITEFGIHQDDFGEGKFITVGWGKKETQFHGSEGKRTAQ
RKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSAVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPPGSLIAATQRHPNKHSVVFMENGLLHGDFTLPFGKEQVKVKELLWNSDSTV
LAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPRGRXAYVSWDPERPLRLH
LVTRGWVSLNYDWGWSTDRSHGEDGHDDANVAVIDGDKVLVSTFRQCVVPPPMCAYDLQL
PAPVNLVTFQRQRTNELAALTADGHISVYGQGTEELSEPAAGLGGFRSVTHAPKLKATYR
VAVDQEEPLALRLLLWLREDVFLGVGACTDGPSQSKMLILGPIEAQGPQPTLEIRSHVEV
EGHVISMCHSSKTGPVALQLEDGQIRKFLWDSLMPSVVEWQDSTGCRINFPDPCVQTALF
TIEEEHLLGLTDRSHLFVGETKVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGLQ
VALAADXGQNQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQL
RKWLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELKE
EDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTVP
ELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEK
SQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQR
LYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASWR
NALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLEWYAKDCEEAISALITGAVW
EEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQKAMFTRHKTRLSVVRELKEKAR
LELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLKE
GTPLEDVALLHALAEIIHSVDKMREEMHSLLKALVLFQFDRQAGRLQHAYGEALQMIEVA
LPEVWQEGLQQTQAPVTGPNSTANSIISTAKTLSNPRFRDPTTPKNEKRCQVEAEYSEVA
FCHRCFLGVFFNCKAMIILS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccatcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcaccgtgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcattgacagtggag
cgctatcttccagaggatggcggtgggacaattgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggctacagccactggtgatgtcattctctacaatctgaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaagacttt
gaacccatcacggagtttgggatccatcaggatgactttggagaggggaagtttatcaca
gtgggctgggggaagaaagaaacccagttccatggctcagagggcaagcgcactgcccag
aggaagactatagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgact
tggagaggagacgggcagctcttcgctgtgagcgctgtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgctggaaaccgccgggtagtttgatagcggcaacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaacggcctcctacacggggacttcaccctg
ccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgactgtg
ttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacgtacatt
cagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggcagc
gaccccagagggcgcncagcctacgtgagctgggatcctgagaggcccctgcggctgcac
ctggtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgcagc
catggggaggacgggcatgacgacgccaacgtggccgtgatcgacggcgacaaggtcctc
gtatcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcagctt
cccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcgctc
acagccgacggacacatctctgtctacggccaaggtactgaggaactgagtgagcctgca
gccggattgggaggattccgatctgtcacacacgcccctaagctaaaggcaacctacagg
gttgcggtggatcaggaggagcccctggctctgcgtctgctgctgtggctgagggaggat
gtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaagatgctcatcctg
ggacccatagaggcccagggcccccagccaaccctggagatcaggtcacatgtggaggtt
gaaggtcacgtgatcagcatgtgtcacagctccaagacgggcccggtggcgctgcagctg
gaggacggccagatcaggaagttcctctgggactctctgatgcctagtgtggtggagtgg
caggactcaacaggctgcagaatcaacttcccagatccctgtgtgcagacggccctcttt
accatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggtgag
acaaaggtggcctccaacgtttcctccttcgtggtctacgatgacttcctgctgctcacc
acacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctgcag
gtggccttggctgctgactgaggtcagaatcagaatgaccagaatgacgagactctccgc
agggtagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatccta
cagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcagctc
cgaaagtggctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctgcgg
atcaacctcaacctgatctacgaccataaccccaaggtgtttttagagagcgtggagact
ttcctgagacagctggactctatcaatcacatcaacctgttcctcacagagctcaaggag
gaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcggcccct
gcggcttgtgggaaaaaggtggatattgtgtgtgatgcgttacgctgcaccatggaatct
atggaccagcacaagtactgtctgtctattttgacgtcacatgtgaagaagactgttcct
gagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgctgcc
aacgcagtgagtgcggaggaggctctgaagtacctgttgtttttagttaatgtcaacgag
ctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgagaag
tcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactttagagccc
aactaccagcgctacaccatcgacaaacacctcaagagatacaggaaggccttgcatcac
ctcagcaagtgtggtgaggagcacttcaccgaagccctgaatttggtgaaggaccagagg
ctgtatagtgaagccctggggctctacccaacagacagccctcagtacaaggcgctgagc
tgtgcctacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttgctg
tggcgctgtggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctggaga
aacgccctctgtgtggcagagcagatccccctgccttctgaccagctggcactgctggcc
agggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattgttg
gagtggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtctgg
gaagaagcacttcgattggtgtatttgtacaacagacaagacatcattgaaacgaacctc
aaaccagctctcttggaagcatgtagttctcagacctcttacctggaagcacagaaggcg
atgttcactcgtcacaaaacccgtctgtctgtggtacgggagcttaaggaaaaagccagg
ctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagaggcc
agtagtgtgatgacaggcagccatgccggctccaagtactcgcatagtaactcccgcatc
tcctcgaggtcgtctaagaaccgccggaaggccgagcgcaagaagctgagtctgaaggaa
gggacccccctagaggacgtggccctgctgcacgccctggcagagatcatccactctgtg
gacaagatgagagaagagatgcacagcctgctgaaggccctggtgctgttccagtttgac
agacaggcggggaggttgcaacatgcctatggggaggctctccaaatgatagaggtggcc
cttcccgaggtgtggcaggagggtcttcagcagacccaggcaccggtcacaggtcctaac
tccacagccaacagcatcatttcaacagccaagaccctcagcaacccaagattcagagac
cccaccacccccaaaaatgagaaacggtgtcaagtggaagctgagtattctgaagtagct
ttttgtcatcgctgttttcttggggttttttttaactgtaaagcaatgatcatcttatca
taa
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