Streptomyces qaidamensis: A4E84_09545
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Entry
A4E84_09545 CDS
T04777
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stsi
Streptomyces qaidamensis
Pathway
stsi00040
Pentose and glucuronate interconversions
stsi01100
Metabolic pathways
stsi02020
Two-component system
stsi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4E84_09545
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4E84_09545
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4E84_09545
Enzymes [BR:
stsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
A4E84_09545
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4E84_09545
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
NosD
DUF6531
DUF5808
Motif
Other DBs
NCBI-ProteinID:
AMW09723
UniProt:
A0A143BX34
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Position
complement(2182422..2184407)
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AA seq
661 aa
AA seq
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MTHLRSKRLPRPGVALAAVAGLVAALGLGATGEARAAEPAPAGMSAPAAARWTDQAHGFA
SLAGGTTGGAGGKVVTVTDQASLAKYAAAEEPYVIRVAGTVAVEPFGSDIVVASNKTIIG
VGDTGEIVHGELHLDPGTHNVIIRNLTIRDSYVEGDWDGKTTDFDAIQMDAVHHVWIDHN
RFTHMGDGLLDIRKDSQYVTVSYNEFSNHNKAFGIGWTTNVQTQITIDHNWFTGTKQRNP
SADNCAYAHLYNNYISAQVADGDPVWTYGNWSRGRSKMVIENSYYDRVQHPYQADTTAEL
VERGSILRKTSGRTDEWGAAFDPRDFYDYRLDPAAAVPALVKKFSGPQRQIGVTLDVPGA
YPTVQAAVDAVPDGNDVPVTIAVAPGTYREKVFIPAAKPKILLRGTGHDRSDTVIVHDTP
AEYGGSTGSATVRIAANDVTARNLTFSNDFDESAVELKGEQALAMKTTGDRIVFEDTAFL
GNQDTLMTDSPKLNVISRVYVRDSYIEGDVDFIYGRATTVIERSVIKALSRGSATNNGYI
TAASTWKDNPYGFLITRSKIVSDAPAGSFHLGRPWHPGGEPNAVAQVLIRDTRLPAAVKS
SPWTDMSGFSWKDARFTEYQNYGPGAAVTQDRPQMSDEDARTHTVTAYLKGSDNWAPHAR
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacctccgtagcaagcgcttgcccagaccgggtgtcgccctggccgccgtcgcg
ggcctggtcgccgccctgggactgggcgcgaccggggaggcaagggccgccgaacccgcc
cccgccgggatgtccgcaccggcggccgcccgctggaccgaccaggcccacggcttcgcc
tcgctggccggaggaaccacgggaggtgccggcggcaaggtcgtcacggtcaccgaccag
gcctcgctggcgaagtacgcggccgccgaggagccctacgtcatccgggtggcggggacg
gtcgccgtcgagcccttcggctcggacatcgtcgtcgcctcgaacaagacgatcatcggc
gtcggcgacaccggtgagatcgtccacggcgaactgcacctcgaccccggcacgcacaac
gtcatcatccgcaacctgacgatccgcgactcctacgtcgagggcgactgggacggcaag
accaccgacttcgacgccatccagatggatgccgtccaccacgtctggatcgaccacaac
cgcttcacccacatgggcgacggcctgctcgacatccgcaaagacagccagtacgtgacc
gtctcctacaacgagttcagcaaccacaacaaggcgttcgggatcggctggacgaccaac
gtccagacgcagatcaccatcgaccacaactggttcaccggcacgaagcagcgcaatccc
tcggcggacaactgcgcctacgcgcacctctacaacaactacatctccgcacaggtggcc
gatggcgaccccgtgtggacgtacgggaactggtcccggggccgcagcaagatggtcatc
gagaacagctactacgaccgggtccagcacccctaccaggccgacaccaccgcggagttg
gtggagcggggctcgatcctgaggaagacgagcgggcggacggacgagtggggtgccgcc
ttcgacccgcgggacttctacgactaccggctcgatcccgcggccgccgtccccgccctg
gtgaagaagttctccggtccgcagcggcagatcggcgtgaccctcgacgtcccgggcgcc
tacccgaccgtgcaggccgccgtggacgccgtgccggacggcaacgacgtgccggtgacg
atcgcggtcgcgccgggcacctaccgggagaaggtgttcatcccggcggccaagccgaag
atcctgctccgggggacgggacacgaccgctccgacaccgtcatcgtccacgacacgccc
gccgagtacggcggttccacgggcagcgccaccgtgcggatcgccgcgaacgacgtcacc
gcccgcaacctcaccttcagcaacgacttcgacgagtccgcggtcgagctgaagggcgag
caggccctcgccatgaagacgaccggcgaccggatcgtcttcgaggacaccgccttcctg
ggaaaccaggacaccctgatgaccgacagccccaagctgaacgtgatcagccgggtgtac
gtccgcgactcgtacatcgaaggtgacgtcgacttcatctacgggcgggcgacgaccgtg
atcgagcggtccgtgatcaaggcgctcagccggggatccgcgaccaacaacggctacatc
acggccgcttcgacgtggaaggacaacccgtacgggttcctgatcacccgctcgaagatc
gtgagcgacgccccggccgggagcttccacctcggccggccctggcacccgggcggcgag
ccgaacgcggtggcccaagtgctgatccgcgacacccggctgcctgccgcggtcaagtcc
tcgccgtggacggacatgagtggcttctcgtggaaggacgcgcgcttcacggagtaccag
aactacgggccgggggccgctgtcacccaggaccgtccgcagatgagcgatgaggacgcg
aggacgcacaccgtcaccgcctacctcaagggcagcgacaactgggcgccccacgcacgc
cactga
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