Streptomyces qaidamensis: A4E84_33405 Help Entry A4E84_33405       CDS       T04777                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism stsi  Streptomyces qaidamensis Pathway stsi03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:stsi00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     A4E84_33405  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:stsi03400]     A4E84_33405 Enzymes [BR:stsi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      A4E84_33405 DNA repair and recombination proteins [BR:stsi03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      A4E84_33405 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S baeRF_family6 Motif Other DBs NCBI-ProteinID:  AMW13965 UniProt:  A0A143CAJ2 LinkDB All DBs Position 7617921..7618880 Genome browser AA seq 319 aa AA seqDB search MSGGDGTRRVRAGRRTVEVHRPDKVLFPGGGDAKEYTKADLVDYYRAVAPFMLPHLRGRP LMLERHPDGIDGPTFMQKNTPDHYPEWIPRVEVAKEGGTVRHTVCDDTATLLYLADQASI TLHRWLSRADSVDHPDRLVFDLDPPPVPEGPGGTPRDDFEAVREAARQLGELLDELDLPS ALMTTGSRGLHVIVPLNGRHDFDEVRAFARDVADTLADAHPDRLTTAARKKERGERLYLD IQRNAYAQTAVAPYTVRPRPGAPVAVPVTWDQLDDPELHARRWTLADAVEQARTDPWSGL LNRGRALGPARRRLNALRG NT seq 960 nt NT seq  +upstreamnt  +downstreamnt gtgagcggtggcgacggcacgcgcagggtgcgggcgggccgccgcacggtggaggtgcac cggccggacaaggtgctcttccccggcggcggcgacgccaaggagtacaccaaggccgac ctggtggactactaccgggctgtcgcgcccttcatgctgccgcacctgcgcggccggccg ctgatgctggagcggcaccccgacggcatcgacggcccgacgttcatgcagaagaacact ccggaccactacccggagtggatcccgcgtgtcgaggtggccaaggagggcggcaccgtc cgtcacaccgtgtgcgacgacaccgcgaccctcctctacctggccgaccaggcgagcatc accctgcaccgctggctgtcccgcgccgacagcgtcgaccaccccgaccggctggtgttc gacctcgaccctcccccagtgcctgaagggcctggggggacccccagggacgacttcgag gccgtgcgtgaggccgcccgccagctcggggagctgctcgacgagctcgacctgccctcc gcgctgatgaccaccggctcacgcgggctgcacgtgatcgtgccgctgaacggccggcac gacttcgacgaggtgcgcgccttcgcccgggacgtcgccgacaccctcgccgacgcccac cccgaccggctcaccaccgccgcccgcaagaaggagcgcggcgagcggctctacctcgac atccagcgcaacgcctacgcccagaccgccgtcgcgccctacacggtccggccccgcccg ggcgcgccggtggcggtccccgtcacctgggaccagctggacgacccggagctgcacgcc cgccgctggacccttgccgacgccgtcgagcaggcccggacggacccctggtcaggcctg ctgaaccggggccgggcgctgggaccggcccggcggcggctgaacgccctgcgcggctga

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