Streptomyces tubercidicus: STRTU_003824
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Entry
STRTU_003824 CDS
T09099
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
stud
Streptomyces tubercidicus
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
Sigma70_r4_2
zf-HC2
DUF5114
Motif
Other DBs
NCBI-ProteinID:
WAU13342
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All DBs
Position
complement(4393245..4395248)
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AA seq
667 aa
AA seq
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MDLDGRDGQRDGEAGAGEQERTRSGQVPGQGGPLTSPDGPHGRADVPPDAGPGVPSQRDP
SRGADPATGPEDRDLPPSDAQLLSDLRAGDDSAYEEMYRRHAPAVRRYARSCCRDVHTAE
DLTGEVFARTLQAVRGGAGPESAVRAYLLTTVRRVAASWAQTARREHLVEDFAVFAVSSA
EAPVDDATLDLGADVRAMQEADRSMAVQAFRSLPERYQTVLWHTTVEEESPSEVAPLLGL
TANATAVLAHRAREGLKQAYLQAHVSQSLTAGGDCARYADRLGAYARGGLRVRAERGLRK
HLDACPRCRLAALEVADVNQRIRALLPVAFIGWFAAGYAVKTAAAGTAGVAAGAAAAAGS
GGSGAHGGAGAGLGKGLGGTVKVGIGVGVAVAAGATLALALAGSPKPAPEPRAQAPRPAP
SAPQRPAPGSPHPSLPPAGGAAPAPKAAPETAPTRKPAPERTAAPRQTPMSKESAPEPAP
TPAPPSPRPSPSKPTPPKPTPPKPTPPAPTPPPPQPTPPPQPAPAAYRVNALRYDFLGDG
SGPEVRALDSSWMWQRQAPEIAGRTYAHGVSVHGQSSVTIDLNRQCTAYDAVAGMDDIGA
GLGAVRFAVYADGVRLWQSAVVRGGEPAVPVHVPLTGRTTLRLVTDPETPFGTAALADWA
QSTISCR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgatgggcgggacgggcagcgcgacggcgaggccggggcgggcgagcaggag
cggacgcggtccgggcaggtccccgggcagggcgggccgttgacttccccggacgggccg
cacgggcgcgccgacgtccctccggacgcggggcccggcgtgccgtcgcagcgggatccc
tcccgcggcgcggacccggccaccggtcccgaggaccgcgatctcccgccgtccgacgcc
cagttgctctccgacctgcgggccggcgacgacagcgcgtacgaggagatgtaccgcagg
cacgccccggcggtccggcgctacgcccgcagctgctgccgggacgtgcacaccgcggag
gatctgaccggcgaggtcttcgcccgcacgctccaggcagtgcgcggcggggcgggcccg
gaatccgcggtgcgcgcctatctgctgacgaccgtccgccgggtggccgcgtcctgggcg
cagaccgcgcggcgggagcacctggtggaggacttcgcggtgttcgcggtgtcctcggcc
gaggcgccggtggacgacgccaccctggacctgggcgcggatgtgcgggccatgcaggag
gccgaccggtcgatggccgtgcaggcgttccgcagtctgccggagcgctatcagacggtg
ctgtggcacaccacggtcgaggaggagtcgccgagcgaggtcgccccgctgctcgggctg
accgcgaacgccaccgccgtattggcgcaccgcgcccgcgagggcctcaagcaggcgtat
ctgcaggcgcatgtcagccagtcgctgaccgccggcggtgactgcgcccggtatgccgac
cggctcggcgcctatgcccgcggcgggctgcgggtgcgggccgagcgggggctgcgcaag
catctggacgcctgtccgcggtgccggctggccgcgctggaggtcgcggacgtcaatcag
cggatccgggcgctgctgccggtcgcgttcatcggctggttcgccgccgggtacgccgtc
aagacggcggcggccggtaccgcgggggtggcggccggtgcggccgcggccgccggaagc
gggggctccggtgcgcacggtggcgccggtgccggcctgggcaaggggctgggcggcacg
gtcaaggtcgggatcggggtcggggtggcggtggcggcgggcgcgacgctggcgctggcg
ctggccggctccccgaaaccggcgccggaaccgcgggcccaggcgccccggcccgccccg
tccgcaccgcagcgcccggcgcccggctcgccgcatccctcgctgccaccggcgggcggc
gccgcgcccgccccgaaggcggccccggagacggccccgacgcggaagccggccccggaa
cgcacggcggccccccggcagacaccgatgtccaaggagtccgcaccggagccggcgccc
accccggcgccgccctcgccccggccgtcgcccagtaagccgacaccaccgaagcccacc
ccgccgaagcccacaccaccggcgcccaccccgccgcctccgcagcccaccccgccgccg
cagcccgccccggccgcctaccgggtcaatgcgctccgctacgacttcctgggcgacggc
agcggaccggaggtgcgcgccctggacagcagctggatgtggcagcgccaggcaccggag
atcgccggccggacgtatgcgcacggggtgagcgtccacgggcagtcctcggtgaccatc
gacctcaaccgacagtgcaccgcctatgacgccgtggcgggcatggacgatatcggtgcg
gggctgggcgcggtgcgtttcgccgtctacgcggacggggtgcggctgtggcagtcggcg
gtggtgcgcggcggtgagccggccgttccggtgcacgtcccgctgacgggccgtacgacg
ctgcggctggtgaccgatccggagacgccgttcggtacggccgcgctcgccgactgggcg
cagtccacgatcagctgtcgctga
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