KEGG   Subtercola endophyticus: LQ955_12480
Entry
LQ955_12480       CDS       T08409                                 
Name
(GenBank) bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
suba  Subtercola endophyticus
Pathway
suba00521  Streptomycin biosynthesis
suba00523  Polyketide sugar unit biosynthesis
suba00541  O-Antigen nucleotide sugar biosynthesis
suba01100  Metabolic pathways
suba01110  Biosynthesis of secondary metabolites
suba01250  Biosynthesis of nucleotide sugars
Module
suba_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:suba00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LQ955_12480
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LQ955_12480
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LQ955_12480
Enzymes [BR:suba01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     LQ955_12480
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     LQ955_12480
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd NAD_binding_4
Other DBs
NCBI-ProteinID: UFS57852
LinkDB
Position
complement(2692066..2693469)
AA seq 467 aa
MSNEPASLTVTATPIPGLLLVQLPVHADNRGWFKENWQREKMVAAGLPDFGPVQNNVSFN
ALAGTTRGIHAEPWDKFVSVTTGRVFGGWVDLREGESFGAVFTVEIGPGQAVFVPRGVGN
SYQTLDNDTSYSYLVNEHWSPHASYTFLNLADETVAIPWPIDLDDAELSEKDRDHPRLGK
VMPVASRKVLVLGANGQLGRALRHKWPEAEFLGRDEFDLSDPRSFAGVRWSDYRVVVNAS
AFTATDAAETPEGRVEAWRTNVSGVAQLVMEAQKHSFVIVHVSSDYVFDGLAREHHEDEP
LSPLSVYGQTKAAGDALVSTVARHYIVRTSWVVGDGPNFVRTMVGLAARGVSPSVVDDQV
GRLTFTADIAGAIDFLLTTAAPFGTYNLSGEGPPQSWADVARRVFELAGRQPDAVDGVST
TVYYDGKSAAPRPTNSLLALDKIESLGFVPGLVDESLRAYVEALLDE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagtaacgaacccgcatcgttgacagtaaccgctacaccgattcctgggctgctgcta
gtgcaactgccggttcatgcagacaatcgcggctggttcaaagaaaactggcagcgcgaa
aaaatggtcgcggccggtctgcccgatttcggccctgttcagaacaatgtgtcgttcaat
gccctggcgggcactactcgaggcatccacgccgagccatgggacaaattcgtctcggtc
actacgggtcgtgtgttcggcgggtgggtggaccttcgcgagggtgagagtttcggcgcc
gtcttcaccgtggagatcggcccgggtcaggcggttttcgtgccccgcggagtcggcaac
tcttatcagacgcttgacaacgacacgtcgtattcctatctcgtgaacgaacactggagt
cctcacgcctcatacacgtttctgaacctggccgacgaaaccgtggcgattccatggccg
atcgatctcgacgacgccgagctcagcgagaaagaccgcgatcatccccgactcggcaaa
gtgatgccggtcgcatccagaaaagtgctcgttctgggcgcgaacgggcaactgggcaga
gcgttacgtcacaagtggccggaggcagagtttctgggccgtgatgagttcgacctctct
gatccgcggagcttcgctggcgtgcgctggtcggactaccgcgtcgttgtaaacgcatcg
gctttcactgcgacggatgccgcagagacccccgaagggcgcgtagaggcctggcgcacg
aatgtttcgggggtcgcgcagttggtcatggaagcacaaaagcactccttcgttattgtt
catgtgtcgagcgactatgtttttgacggtctagcgcgcgaacatcacgaagacgagccc
cttagtccgcttagcgtctacggtcagaccaaagctgccggcgatgctctggtgtcgacg
gttgcacggcactacatcgtaagaacgagttgggtggtgggcgacggcccgaatttcgtt
cgcactatggtcgggttggccgcccgaggcgtttctccgagcgttgtcgatgaccaggtc
ggtcgtcttacgttcacggcagacattgctggtgccatcgattttctgttgaccactgcg
gcgccattcggaacctacaacctctcaggtgaagggccgccgcaatcgtgggccgatgtc
gcccgtcgtgttttcgaattggccggccgccagccagacgccgtcgatggcgtcagtaca
acggtttattacgatggcaaaagcgccgcgccgcgccccaccaacagcctattggcgctc
gacaagatcgaatcgctcggctttgtgccgggcctggtagacgaatctctgcgagcctac
gtcgaggctttgctcgacgagtga

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