Subtercola endophyticus: LQ955_19245
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Entry
LQ955_19245 CDS
T08409
Name
(GenBank) hypothetical protein
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
SpvB
Motif
Other DBs
NCBI-ProteinID:
UFS59086
LinkDB
All DBs
Position
4145116..4151493
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AA seq
2125 aa
AA seq
DB search
MKNLSNRVIRTTALGVTIAVTAATLTGTSALSAAAASIPPAPFDGTLVPGSSAPMLPTPP
TPASSASTATVESALPASGSYTLATPTKVGSVPLTTQTATGGTPAAMAGDWSPLGSTGLS
IAPATTANVAMGTTAQSLIGQPVQSVSATVLDANTAAKHGLTGLVLQLARNDKTDTVAPV
GVRIPTSLLAGLYGADFAARTRWVQIPFDATGTDPSAQTTVAATSDAADNAIVVTPQVSS
AAVMLTALSTPVSSTGTGSFSATSLKPASSWDVSAQTGDFSWSYPMSVPPAAAGLSPSVN
LTYDSQSVDGETGSSNNQPSAVGDGWSLGGSGFIERTYVSCSQDNGASGPVTTSGDLCWK
TDNATLSLGGHTGQLVKDAGTGAWRLQSDDGSRIEHLVGTAAGCAANGTYDTDCWRLTTR
DGTQYYFGLNQLPGWATGKPTTNSTFTVPVYGNDSGEPCHAATFAASACTQAWRWNLDYV
VDAHNNAEALYYDTETNKYSQNGGTAVSYIRGGQLDHIDYGMTAATIYSANAASDKVAFG
YDQYGRCSDTTHANCTTETITSAPVTAAHPTSYPDVPFDQFCNGSTCPNLVSPTFWTTGM
LDTVTTKVLKSGAYSNVDVWTLGHSFPDPGDGTNAALWLTQVAHSGYDGANSLPEPTTMF
TGATMQNRVWVINGLAPLDKWRISSILTSTGAVISVSYSAQQCDATSAPAIEASPQSNTS
RCFPQWWTPQIVPAVAATEDLFHKYVVTKVISNPKTGGDNDKPQETDYNYTGTPAWRYDT
SPLTPDSQKTWSQYAGYNTVEIRVGDPGTPAKQQTTDYTFYQGMDGDRATATGGAKTVKV
TGSTTLDDSRWFAGSTREVKVLNGVGGAVVSDTVNTPWAGPITANDNTLTARMTGQQETL
LTEPVSTGGNRTTDTTTGYDSAYGLPTTANTTTSDAGSTCTTTSYAPANTTAWLIGLPDE
TAKVGVACANVATAVYPAAAVSDTRTIYDNLAWAATPTKGDATTTKIVSSYTGSAAATAV
WTTSGKAAYDSLGRTTSTTDIMNHTTTTAYTPATSAAGSGGLTKTVTTNTLGWTNTETFN
PSWGAETSATDQNANVTTATYDPLGHRTAVWLPTWPQAANPNTPSISYAYTLSQTSPNAV
ATTVLKGGQNVEQFTLYDGLGRQVQTQAASYGGTLVTDTDYDAAGMVYLTNNPYSEPTTA
MSAALFIGYNAQNIDSSVSTDYDGAGRALHTILNHGGVERYRTTNTYLGADRVDTVPPAG
GTPTSSYTNTLGEKTRLVQYLAPTISGTQEATTYGYNPGGNMTSMTDPAGNNWTWAFNVL
GQQTQAVDPDTGTTNSTYDLAGNTLTTTDSRGITLAYSYDALNRKTGQYQNAVGAAGLEL
ASWNYDTATGGKGQLTSSSSYTGSTAGNPGLAYTDTISGYDGLYDPAGETISIPTGAPAF
GGTTYSTSMYYKVDGSIAEKDYPATGGIAGESLRYLYDSLGNTYASGGLTTYGLMFYSPL
GQVSQIKKNGTTTQTTGYAYDPSSGATSEISDSTTTAAVTTMQSDRMYTHDNAGNVTSDK
TTGTATDTQCYTYDYLQDLTAFWTPTSNNCATTPTSTTIGGAAPLWKTYTVDPATGNRTS
VVGHATTGTGVDTTKTYTYPAATTSHPHAVSNVAATTSGTTTNLGYGYDNAGDTTTRPGQ
SLTYTPTGKVATDTVGTSVQTDVYDASGSLLLQKDSSNGATLYLGDTQIRIANGATAQSV
VRTYALKGIPVAERISAAGSTTSAVYWLGNDIDGTPDLETNATTGVITHRYQDPYGNTRG
AAATWSSQNQYLDDPTSGLTGLTQIGARAYDPTIGKFLTVDAVLSPFIPAQNNGYDYAGN
SPITNTDPSGNCFTIDDSICAGHAPTNSKYNPGANDNHGGGTPPAPGNGGGGGGGSSGGG
APGGTVTQSGKGCQATGTTGCLSTTKTATPQQLQTARTNANQAIQGLLAVGIVIGALCVT
ATFGLCTPAEAGIAAAEGAVGAVDVAEGVEAGGGQLAQDAAVNPAAPRELLLDRPVGGSA
SQNAFVQDRIGALQENGATEFRVNQQQVDLSGNRVGINRPDLQYTMNGQRYYEEFDVPPS
LRAAGHEQRILSNDPDGVVQLFEVK
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctctcgaaccgggtcatacgcaccaccgcgctcggcgtgacgatcgcggtc
accgcggcaactttgaccgggaccagcgcgctctcggcggcagcggcgagcatcccaccc
gcgcctttcgatggaaccctcgttcctggcagctccgcaccaatgctgcccacgccgccg
acaccggcatcttcagcgagcactgccacggtagagtctgcgctccccgcttctggctcc
tacacactcgcaacaccgacaaaagtgggctccgtacctctgacgactcaaaccgctacc
ggcggcacaccagcagccatggcgggcgactggtctccgctcggctccaccgggctcagc
atcgcgccggcgaccaccgcgaacgtcgccatgggaacgactgcgcaaagcctgatcggt
cagcccgtgcaatcagtgagcgccactgtgttggacgcgaatacggcagccaaacacggc
ctcaccgggctcgtgctacaacttgcccgcaacgacaagaccgacaccgtagcaccggtc
ggggtgcgcatcccgactagtctgctcgccggtttgtatggcgccgacttcgcagcccgc
acccgatgggtgcagatcccgttcgacgcgaccggtacagatccgagcgcgcagacaact
gtcgctgcgacctctgacgccgcagataacgcgatcgtcgtcaccccgcaggtttcctcc
gccgcggtgatgctgacagccctgtcgacgccggtgtcttcgaccgggaccgggtcgttc
tcggcaacctcattgaaacccgcgtcgtcgtgggacgtgtccgcacagacgggtgacttc
tcgtggtcttatccgatgagtgttccgcccgccgcggccggcctctcaccgagcgtaaat
cttacctatgactcgcagtccgtcgacggagagaccgggtcgagcaacaaccaaccctct
gcggtcggcgatgggtggtcgctcggcggcagtggtttcatcgaacgcacctacgtttcc
tgttcccaagacaatggcgcctccggccccgtcaccacctccggggatctctgctggaaa
accgacaacgctaccctgtctctcggtggccacaccgggcagctcgtgaaagacgccggc
accggcgcatggagattgcaatccgacgatggatcccgcatcgagcatctcgttggcacc
gccgctggctgtgccgcgaatggcacgtacgacacggactgctggaggctcaccacccgc
gacggcacccagtactacttcggcctgaaccagcttcccggctgggcgaccggaaaaccg
acaacgaactccaccttcaccgtgcccgtgtacggcaatgacagtggtgagccgtgccac
gcggcaaccttcgccgcatcagcgtgcacgcaggcgtggcggtggaacctcgactacgtc
gtcgacgcacacaacaacgccgaagcgctttactacgacaccgaaacgaacaagtactcc
caaaacggtggcaccgccgtgtcatacattcgcggtggccagctcgaccacatcgactac
ggcatgaccgccgcgaccatttactccgcgaatgccgcttcggacaaggtcgccttcggc
tacgaccaatacggtcgctgctccgacaccacccacgcgaactgcaccaccgaaaccatc
acctcagccccggtcacggccgcgcacccgacatcgtaccccgacgttccgttcgaccag
ttctgcaacggcagcacctgcccgaacctggtctctccgacgttctggaccaccgggatg
ctcgacaccgtcaccacgaaggtcctgaaatctggcgcgtacagcaacgtcgatgtctgg
actcttgggcattccttccccgacccgggcgacggaacaaacgctgcgctctggcttacc
caggtcgcccactccggctacgacggcgcgaactccctccccgaaccgaccacgatgttc
accggcgctaccatgcaaaaccgggtctgggtaatcaatgggctcgcaccattggacaag
tggcggatctcctcgatactgacctcgaccggtgcggtgatctcggtgagctactccgct
caacaatgcgatgccacgagcgctccagcgatcgaggcgtcaccccaatcgaacacgagc
aggtgtttcccgcaatggtggacacctcaaatcgtgccagccgtcgcagcaactgaggac
ctgttccacaagtacgtggtcaccaaggtgatatcgaacccgaagaccggcggtgacaac
gacaagccccaggaaaccgattacaactacacgggcacacccgcctggcgctacgacacc
tcaccactcaccccagacagtcagaagacctggtcgcagtacgcgggctacaacacggtc
gaaattcgagtcggcgaccccggcaccccggccaaacaacaaaccaccgactacaccttc
taccaaggcatggacggcgaccgcgcgaccgcaaccggtggcgcgaaaaccgtgaaggtc
accggcagcaccaccctcgatgactcgagatggttcgccggcagcactcgcgaagtcaaa
gtactcaacggtgtcggaggcgctgtcgtttccgacaccgtgaatacgccctgggccggg
ccaatcaccgccaacgacaacacgctcacggcacgaatgacgggtcagcaagagaccctg
ctcaccgaaccggtatccaccggcggaaaccgcaccacggacaccaccaccggctacgac
agtgcctacgggctgccgaccacggccaataccaccacctccgacgcgggaagcacctgc
acgaccaccagttacgcgcccgcgaacaccaccgcgtggctgatcgggcttccagatgaa
acggcgaaagtcggtgtcgcctgcgccaacgtcgcaaccgccgtatacccggcggccgcg
gtctcggacacccgcacgatatacgacaacctcgcctgggccgctacccccaccaaggga
gacgccaccactaccaaaatcgtctcctcttacacgggttcggcggccgccaccgccgtg
tggacaacgtcaggcaaagccgcgtacgacagcctcggccgtacgacatccacaaccgac
atcatgaaccacaccaccactaccgcctacactcccgcgacatccgcggctggctcgggc
ggcctgaccaaaacagtcacgacgaacactctcggctggacaaacaccgaaacgttcaac
ccgtcctggggtgccgaaacctcggcgaccgaccagaacgccaacgtcaccacggcgact
tatgacccgctgggtcaccgtacagcagtctggctaccgacttggccgcaagccgccaac
cctaacaccccatcgatcagttacgcctacacgctctctcagacgtctccaaatgcggtc
gccaccacagtactgaagggagggcaaaacgtcgaacaattcaccctctatgacggcctt
ggccgtcaagtgcaaacccaagccgcaagctacggcggaacacttgtcaccgacaccgac
tacgacgctgcgggaatggtgtatctgacgaacaatccttacagtgagccaaccactgcg
atgtcagccgcgctcttcatcggctataacgcgcagaacatcgactcgtcggtttccacc
gactacgacggcgccggccgtgccctccacaccatcctgaaccacggcggggtagaacgt
taccgcaccaccaatacctacctcggcgcggaccgtgtcgacacggtgccacccgcgggc
ggcacaccgaccagctcgtacaccaacaccctgggtgaaaaaacaagactagtccaatat
ctcgcgcccacgatcagcggcacccaggaagccaccacctacggatacaacccaggcggg
aacatgacttctatgaccgaccctgccgggaataactggacttgggcgttcaatgtgctc
ggccagcagactcaagctgtcgaccccgacaccggaaccaccaacagcacctacgacctc
gccggaaacaccctcaccaccacagacagccgcggcatcaccctcgcgtactcctatgac
gccctgaacagaaagaccggccaataccaaaacgctgtcggcgcagccggtctggaactc
gcctcctggaactatgacaccgctaccggaggaaaaggccaactgacaagctccagcagc
tacaccggttcaaccgccgggaaccccggccttgcgtacaccgacaccatcagcggctac
gacggcctctacgacccagccggcgaaaccatcagcattccgaccggcgcgcctgcgttc
ggcggaaccacgtacagcacatccatgtactacaaagttgacgggagcatcgctgaaaag
gactaccctgccacgggcggtatcgccggcgaaagcctccgatatctctacgacagtctc
gggaacacctatgccagcggcggcctgaccacttatggcctcatgttctacagccctctc
gggcaagtctcccaaatcaagaaaaatggcaccacaacccaaaccaccgggtacgcctat
gacccatccagcggcgcgacttcggagatctccgactccaccactaccgcagctgtcacc
accatgcagtccgaccggatgtacacccacgacaatgccggcaacgtcacctctgacaag
accaccggcaccgccacagacacccagtgctacacctacgactacctccaagacctgacc
gctttctggacaccgaccagcaacaattgcgccaccacccccacctcgaccaccatcggc
ggtgcggcaccgctctggaagacctacaccgtcgaccccgccacggggaaccgcaccagt
gttgtcggtcacgcgaccaccggtacgggtgtggatacgaccaagacgtacacctacccg
gcagcaacgacatcgcatccgcacgctgtttcgaacgtcgctgcaaccacatcgggcacc
acgacgaacctcggctacgggtacgacaatgctggtgacaccaccacacggccgggtcaa
tctctgacgtacacgccgaccgggaaggtcgcgactgataccgtcggcacgtctgtgcaa
acggacgtgtacgacgcgtcaggatccctgctgctgcaaaaggactccagcaacggtgcg
actctgtatcttggtgacacgcagatcaggatcgcgaacggtgcgaccgcccaatccgtg
gtccgcacctacgccctgaaaggtattcctgtcgctgaacgtatcagtgccgctggttcc
acgacgagtgcggtgtattggcttggtaacgacatcgatggcactcccgacctggaaacc
aacgccacgaccggtgtgataacgcaccgctatcaagacccttatggcaacacccgcggt
gccgccgcgacctggtcatcacaaaaccaatacctcgacgacccgacctccggtctgacc
gggctcacccagatcggggcgcgcgcgtacgatcccacgatcggtaagttcctcaccgtc
gacgccgtgctgtcgccgttcatcccggcgcagaataacggatacgactacgccggtaat
agcccgatcaccaacacagacccgtcggggaactgcttcacgatcgatgactcgatctgc
gccggccacgcgcccaccaacagcaagtacaacccgggcgcaaacgataaccacggcggc
ggaacaccacccgcccccggaaacggcggtggtggcggcgggggctcgagcgggggcggg
gcaccgggtggaaccgtgactcagtcaggcaagggctgccaagccaccggcaccacagga
tgcctgtcaaccaccaaaacagccaccccacaacaactccaaaccgcacgaaccaacgcc
aaccaagccatccaaggcctgctagcggtcggaatcgttatcggcgccctgtgcgttacc
gcgaccttcggactctgcacaccagctgaagccggcatagcagccgccgaaggggcggtc
ggcgcagtagacgttgcagagggggtagaagccggcggaggccaactcgctcaagacgcc
gcagtcaaccctgccgctccgcgtgaacttctgttggataggcccgtgggtggcagtgca
tctcagaatgcgttcgttcaggatcggattggcgcattgcaagagaacggcgcgactgaa
tttcgcgtcaatcaacaacaggttgatctgagcggcaaccgcgtcgggataaatagacca
gacctgcaatatacgatgaatggccaacggtactacgaagaatttgacgttcctccctca
cttcgtgcggctgggcatgaacagagaatactttcgaatgatccggatggggttgtgcaa
ctgtttgaggtgaagtga
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