Sulfurimonas lithotrophica: FJR48_02580
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Entry
FJR48_02580 CDS
T06298
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sulg
Sulfurimonas lithotrophica
Pathway
sulg00540
Lipopolysaccharide biosynthesis
sulg01100
Metabolic pathways
sulg01250
Biosynthesis of nucleotide sugars
Module
sulg_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sulg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FJR48_02580 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sulg01005
]
FJR48_02580 (rfaD)
Enzymes [BR:
sulg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FJR48_02580 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sulg01005
]
Core region
FJR48_02580 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Ldh_1_N
KR
Motif
Other DBs
NCBI-ProteinID:
QFR48668
UniProt:
A0A5P8NZ04
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Position
490318..491328
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AA seq
336 aa
AA seq
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MKYNDIDFNNKTVLITGGAGFIGSNLAFYFQENYPKCNIVVLDSFRSGETLSNGNLKSFG
HFKNLLGFKGKVISGDINDKSLLASINEEYDFDYIFHQAAISDTTASEQDLMIQTNVNAY
EDLLKIAIKHNANMIYASSAATYGDSDRFEVGFEQPNNVYGFSKVMMDNITYKYIEQGVD
ISIVGLKYFNVYGPREYFKNKTASMVVQFGHQILNGQTPKLFEGSDKILRDFIYIDDIVQ
ANILACEPKKSGVYNVGTGKARSFEDIVNILQKELAIDNGKEYIPNPFVGQYQFFTEANI
DTTKENLGYKPNYEMEDGIKAYLPEIKRLFDVEVKK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaacgacatagactttaacaataaaacagttcttatcactggtggtgcgggt
tttataggctcaaatttggcattttattttcaagaaaactatccaaaatgtaatatagta
gttttagatagttttagaagcggtgaaacacttagtaacggaaatctaaagagctttgga
cattttaaaaaccttttaggttttaaaggaaaagttatcagcggagatatcaatgataaa
tctttacttgcatctataaatgaagagtatgattttgactatatctttcatcaagctgct
atctctgatactactgcatctgagcaagatttgatgattcaaacaaatgtaaatgcttat
gaagatctattaaaaatagcgattaaacataatgcaaatatgatctatgcatctagtgcc
gcgacctatggagacagtgacaggtttgaagttgggtttgaacagccaaacaatgtatat
ggtttttcaaaagttatgatggacaatattacatacaaatatattgaacaaggtgtagat
atctccatagtcggtcttaaatattttaatgtttacggtccaagagaatactttaaaaat
aagaccgcatctatggttgttcagtttggtcatcagatattaaacggacaaacgcctaaa
ctatttgaaggaagcgataaaattttaagagattttatctatatagatgatattgttcag
gcaaatatattggcgtgcgaacctaaaaaaagcggtgtgtataatgtcggtacgggaaaa
gcaagaagttttgaggatattgtaaatatacttcaaaaagagcttgcaatagataacggc
aaagagtatattccaaatccttttgttggtcagtatcagttttttacagaagcaaatatt
gacactacaaaagaaaacttgggttataagccaaactatgaaatggaagatggaattaag
gcatatttacctgaaatcaaaagactattcgatgttgaggttaaaaaataa
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