Sulfurimonas xiamenensis: FJR47_07235
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Entry
FJR47_07235 CDS
T06240
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
suln
Sulfurimonas xiamenensis
Pathway
suln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
suln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR47_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suln03400
]
FJR47_07235
Enzymes [BR:
suln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJR47_07235
DNA repair and recombination proteins [BR:
suln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
FJR47_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
VpsT-like_REC
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QFR43716
UniProt:
A0A5P8NNX8
LinkDB
All DBs
Position
complement(1434045..1437035)
Genome browser
AA seq
996 aa
AA seq
DB search
MSQNTLFQYYKTDKKQDLELLICQDSKEAHELENVAKFFKQDVLVFPDFRAAFGDDLRVY
KEELHQLFSCLRRYYALKKKPLIISPLKTLLFYLPNESLFDSVSLEFGAKIELKKFQKKM
LFWGYNFVDMVQVEGEISFRGDIIDIYPPSSKMPLRISLFDDEIEQIKYFELESQRTQKD
EIESIEITPAFYSLSEEKFDSLNEKIKQSEFNSLVKDIASLGLWYLGDSAINFLEGKNAK
LVRNLDALLTDAYVLNKPMLSRESFDLEILPTSDDFKELVVTDVHSLLRVHKDKKTTIIA
SNEAVVKQAGLFDLNKIEIVYAPYILNILSKDELVISLNKPQRAKRRRKSSILLDDLKTG
DYVVHEDYGVGIFETIEQTEILGGVKDFIVIKYVGDDKILLPVENLDAIDRYIASSGSIP
VLDRLGKGSFGKLKESVKKRLMEIAGQIVNTAAARELIQAPKISIDTNELKEFQKLSGFE
YTDDQIQSINEIIAQMSSGHIMDRLLSGDVGFGKTEVAMNTIFAAYKSGFQSAFIVPTTL
LSAQHYRSLHERFDAFGIKCSKLDRFVSAKDKKNIIKALASGDLDVVVGTHTLFDLDFKN
LGVVIIDEEHKFGVKQKEKIKELYHNVHLLSMSATPIPRSLNQALSSIKTMSQLLTPPSE
REPVRTFVKEYEEKFIKEIILREIRRGGQIFYVHNSIDHMPIKFGELKALLPELRVVMLH
SKISATETEKELLKFEAGEYDLMLATSIIESGIHMPRVNTIIVDGADRFGMADLHQLRGR
VGRGKIEGFAYFIVENRENLTDDAKKRLLALESNSFLGSGSILAYHDLEIRGGGNLVGDA
QSGHIKNIGYSLYLRMLEDAIKLLSNQAQSQKIKVDIKLTISAYISDEVVKEDRLRLDIY
RRLSACEQSVEIYEIQEEVIDRFGEIDTPTKQFFELMVIKLLSLEKKIKSVTNYGQNITF
TYMDEKKKSIKSDSKDDDDIIRATLLYLRNNTLKAV
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaatacacttttccaatactataaaactgataaaaaacaagatttagaactc
ttgatctgtcaagactccaaagaagcccatgaacttgaaaatgtagcaaagttttttaag
caggatgttctggtttttcccgattttagagctgcttttggagatgatttaagagtatac
aaagaggagcttcatcaacttttttcttgtttgagaagatattatgctctgaaaaaaaag
cctttgattatatcgcctcttaagacacttttgttctatctgccaaatgagagtttgttt
gactctgtttctttggagtttggtgcaaagatagagctgaaaaaatttcagaaaaagatg
ctgttttggggatacaattttgtagatatggtgcaagttgagggggagatatcttttcgc
ggagatattattgacatatatccgccttcaagtaaaatgcctttaagaatttcacttttt
gatgatgagatagagcagataaagtattttgaattagaatctcaaagaacccaaaaagac
gagattgagagtattgaaataacaccggctttttactctttgagcgaggaaaagtttgac
agtttaaatgaaaaaatcaaacaaagtgaatttaactctttagtcaaagatatagcatct
ttgggtttatggtatcttggtgacagcgccataaattttttagagggtaaaaacgcaaaa
ttagtcagaaatttagatgctcttttgactgatgcttatgtgcttaataaacctatgctc
tcaagagagtcttttgatcttgaaattttaccgacttccgatgattttaaagagctggtc
gtaacagatgttcactctcttttaagagtgcataaagataaaaaaacaactattattgct
tcaaatgaggctgttgtaaagcaggccggattgtttgatttaaataagattgagatagtt
tatgctccatatattttaaatattctcagtaaagacgagcttgttatttctcttaataaa
cctcaaagggctaaacgaagaagaaaaagctcaattttgcttgatgatttaaaaacgggt
gattatgttgttcatgaagattatggcgtcggtatatttgaaaccatagagcagactgag
attttaggcggtgttaaagattttattgttatcaaatatgtaggtgatgataaaattttg
ctccccgtggaaaatttagatgcgatagaccgctatattgcatcaagcggttcgattcct
gttttggacagacttggtaaagggagttttggcaaactaaaagagagtgttaaaaaaagg
cttatggaaattgcaggtcaaatagtcaatactgcagctgcaagagagttgattcaagct
cctaagattagcatcgataccaatgaactaaaagagtttcaaaaactctcaggttttgag
tatacggatgatcagatacaatctataaatgagataattgcgcagatgagttccgggcat
attatggacaggcttcttagcggagatgtcggttttggcaaaactgaagttgcaatgaat
accatatttgcagcatataaatcaggttttcagtcagcttttattgttcctacaacactt
ctttcggcgcagcactaccgttcactgcatgaaagatttgatgcttttggcattaaatgc
tcaaaactcgatcgctttgtaagcgcaaaagataaaaaaaatattattaaagctttggca
agcggagatctggatgtcgttgtcgggacacatactctttttgatctggattttaaaaat
ttgggcgttgttattatagatgaagagcataagtttggcgtaaagcaaaaagagaagata
aaagagctttatcacaatgtgcatcttcttagcatgagcgcaaccccgattccgcgctct
ctcaatcaggctctaagttctataaaaacgatgtcacagctgcttactccgccaagcgag
agagagccggtgagaacatttgtcaaagagtatgaagaaaaatttattaaagagattatt
ttaagagagattagacgcggcgggcagatattttatgttcataattcaattgatcatatg
ccgataaagtttggcgaattaaaagcacttctgccggagttgagagtcgtaatgcttcat
tcaaaaatttcagcaacagaaacagagaaagagctcttaaagtttgaagcaggcgagtat
gatttgatgcttgctacctctattatagagtcaggtattcatatgcctcgtgtaaatacc
ataatagttgacggtgcagacagatttggaatggcagatctacatcagctgcgaggtcgc
gtaggaagaggaaagatagaaggatttgcatattttattgtagaaaatagagaaaattta
acagatgatgcaaaaaaaagacttttagctcttgagtcaaactcatttttgggaagcggc
tcaattttagcataccatgatttagagattcgaggcggcggaaacctggtaggcgacgct
cagagcgggcatattaaaaatataggctactctttgtatcttagaatgttagaagatgct
ataaaattactgagcaatcaggcacagagccaaaagataaaggttgatataaaactcacc
atctcagcttatatttctgatgaggttgtaaaagaggatagacttcgtttggatatctat
agacgcctctcggcgtgtgagcagagtgtagagatatatgagatacaagaggaagtgata
gacagatttggggagattgatactcctacaaaacagttttttgaactaatggttattaaa
cttttaagtctagaaaaaaagataaaaagtgtaacaaattatggacaaaatattacattt
acatatatggatgagaaaaaaaagagcataaaatcagactccaaagatgatgatgacatt
attagagcaacgcttctttatcttagaaacaatacattaaaggcagtatga
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