Sulfurovum sp. NBC37-1: SUN_1886
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Entry
SUN_1886 CDS
T00572
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUN_1886 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sun03019
]
SUN_1886 (pnp)
03016 Transfer RNA biogenesis [BR:
sun03016
]
SUN_1886 (pnp)
Enzymes [BR:
sun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SUN_1886 (pnp)
Messenger RNA biogenesis [BR:
sun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SUN_1886 (pnp)
Transfer RNA biogenesis [BR:
sun03016
]
Prokaryotic type
tRNA degradation factors
SUN_1886 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
KH_1
S1
S1_2
Rrn7_cyclin_N
DUF1722
Motif
Other DBs
NCBI-ProteinID:
BAF72833
UniProt:
A6QBH4
LinkDB
All DBs
Position
complement(1939689..1941878)
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AA seq
729 aa
AA seq
DB search
MNEQIIEINLNNLDEKYEFNKIAKQASGAVMYRQGKAVLIAAVAVDEKAVEEDFLPLTVQ
YMERSYAAAKIPGGFIKRETKPGDFETLTSRIVDRSLRPLFPKGFYYPVTISVMVVSSDS
EVDMQVAALHAANAALYVSDISVQRSIAAVRVGKIEDELVLNPTLSQQDESVLDLLVVGS
EQDIIMIEMRAIASEKIDDIEMDMIDPMMGGVPLILEHQECNEVDNEALVDAIAFAAKAI
EEASAIYEKEFTPVMRTPLGLSLAEEKVDEELYAYIKENYSEAVAKAISHMAKSERSTEL
KKVRAQIMEALESEGKEADKELVSKVLDRYKTTVVRDMILDKGIRADGRGLDEVRPITIE
TNILPSVHGSCLFTRGQTQALVTATLGDKKDAQMFELITDKNTQSENFMVHYNFPGYSVG
EAKFIGAPGRRELGHGNLAKRALEPVIPINYDGTIRLVSEVLESNGSSSMATICGGALAL
RAAEVDMVELVAGIAMGLVTDGERVAVLTDIMGLEDHDGDMDFKIAGTRNGITALQMDIK
LGGIDLITLKVALEKAAQGKDHILDLMEEAEKKMESSQALPSTEHFSINPQKIADIIGKA
GATIRDIIEKFEVSIDLDRDKGGVKLSGHDKEKVAAAKEHIEKIANAPVRKQMQYEVGKT
YVGKVKKIVDFGIFVEMPDGFDALLHISKVAKERVNNLNERYHEGDDITVVVMEQKGKKV
ELATPEYLA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacagataattgagataaacctgaacaatcttgacgaaaaatatgaatttaat
aaaatagccaaacaggcaagtggtgcagtgatgtaccgacagggaaaagcagtactcatt
gcagcggtcgcggtcgatgaaaaagcagtagaggaagattttcttcctctgacggtacag
tatatggagcgttcctatgcggcagcgaaaatcccaggtggtttcatcaaaagagagacg
aagcctggtgatttcgaaacactgacctcgcgtatagtggaccgttcactgcgcccgctt
ttccccaaagggttttattatcctgtgacaatctcagtaatggtggtcagcagcgacagt
gaggttgatatgcaggtggcagcacttcatgcagccaatgctgcgctgtatgtttccgat
atttctgtgcagaggagcatcgcagcggtcagggtaggaaaaatagaagatgaactggta
ctcaatcctacgctgagccaacaggatgaaagtgtactggacttgcttgtggtaggttct
gaacaagatatcataatgatcgagatgcgtgcaatcgcttcggagaagatcgacgatatc
gaaatggatatgatcgatcctatgatgggtggtgttccgctgatcctggagcatcaggag
tgtaatgaggtggacaatgaagcgttggtggatgccattgcatttgcggctaaggccatt
gaagaggcaagtgccatctatgaaaaagagttcacacctgtcatgagaacaccacttggt
ctttcgttggctgaagaaaaagtggatgaagagctgtatgcatatataaaagaaaactac
agtgaagctgtagccaaagcgatctcacatatggcaaagagtgagcgttctactgaattg
aaaaaagtacgtgcacagatcatggaagctctggaatcggaagggaaagaggcagataaa
gagctggtttccaaagtgctcgaccgatacaaaactacggtcgtacgtgatatgatattg
gacaaagggatccgggcggacggaagagggctcgatgaggtcaggccgatcactatcgag
accaatatccttccttcggtacacggttcatgtctctttacacggggacagacacaggca
ttggtgacagccacactgggagataaaaaagatgcacagatgttcgaactcattaccgac
aaaaatacccagtcggagaatttcatggttcattacaattttcctgggtactctgtaggg
gaagcgaagttcatcggtgcgcctggccgtagggaactggggcatggaaatctggccaaa
agagctcttgaaccggtgatccctatcaattatgacggaacgatccgtctcgtctcagaa
gtattggagagtaacggttcttcctccatggcgaccatctgcggtggagctttggcattg
cgtgccgcggaggttgatatggtcgaactggttgccggtatcgccatgggtttggtgaca
gatggagaaagggtggcagtactgaccgatatcatgggacttgaagatcatgacggtgat
atggatttcaaaatagccggcacaagaaacggtattacggcacttcagatggatatcaaa
ttgggcggtattgaccttatcacactcaaagtcgctctggaaaaagcggcacaggggaaa
gaccatattcttgacctgatggaagaggcagagaagaaaatggaatcgagccaggcactg
ccgagtaccgagcatttcagtatcaacccccagaagatcgccgatatcataggcaaagcg
ggtgcaacgatccgtgatatcatcgaaaaattcgaagtcagtatcgaccttgaccgtgac
aaaggtggggtgaaactttcaggacatgacaaagagaaggtcgctgccgccaaagagcat
atcgagaagatcgccaacgcacctgtgagaaagcagatgcaatatgaagtaggaaagacc
tatgtcggtaaagtcaagaagatcgtagatttcggcatctttgtcgaaatgccggatggt
ttcgatgccctgcttcacatatctaaagtcgccaaagagagagtcaataacctcaatgag
cgttaccatgaaggtgatgatattacggtggtggtgatggaacagaaggggaaaaaggta
gagttggctacaccagagtacctggcttag
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