Sceloporus undulatus (fence lizard): 121914488
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Entry
121914488 CDS
T07740
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121914488 (RBFOX1)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121914488 (RBFOX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
Motif
Other DBs
NCBI-GeneID:
121914488
NCBI-ProteinID:
XP_042293870
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All DBs
Position
8:complement(37351823..38674234)
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AA seq
603 aa
AA seq
DB search
MSTPSSSLEDAVKPRARDGKMRREEGDDPQPEGKRLKLGNEGGNSGKEEGEEGGGGGEQG
GEESDRMFCAGREESGTQTEGDGEGQTGYKSELMESASGARNAPQGPVLTMLAASKVEET
TQKLHVSGTYSFLERSINSDTKVECSSCVETEDRKISRQQMNCERGQLRGNQEATAPPDT
MAQPYASAQFAPPQNGIPAEYTAPHPHPTPDYTGQTTVPEHTLNMYPPAQTHSEPNTSDT
NAQTVSGTATQTDDAAQTDGQQQTQSSENTDNKSQPKRLHVSNIPFRFRDPDLRQMFGQF
GKILDVEIIFNERGSKVKRMKRSRFQPKIINDPSVACETNKKKEKCFFAPQWHVPTTNVL
EQGFGFVTFENSADAERAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPV
VGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRG
RGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTTATAAAYSDSYG
RLYTADPYHHTLAPATTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRF
APY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccttccagcagcctggaggatgcagtgaaaccgagagcccgagatggcaag
atgagacgcgaggaaggggatgatccacaacctgaagggaagagactgaagctggggaat
gaaggagggaacagtggaaaagaggaaggagaagaaggtggtggtggaggagaacaagga
ggagaagagagtgacagaatgttttgcgccgggagagaagagtctgggacccagacggag
ggagacggagaaggccaaactggctataaatctgagctgatggaatcggcttccggtgcc
aggaacgctcctcaaggtccagttttgaccatgctggctgcaagcaaagttgaggaaact
acacagaagctccatgtaagtggaacctacagttttctggagcggagcatcaattctgat
actaaagtggagtgcagctcttgtgtagaaacagaggacagaaaaatctcaagacaacag
atgaattgtgaaagggggcagctaaggggtaaccaggaagcgacagcacctcctgacaca
atggcacagccttacgcctcggcccagtttgctcctcctcagaacggcatccccgcagaa
tacaccgccccccatccccacccgactccagactacacaggccaaaccacagttccagag
cacacattaaatatgtacccgcctgctcagacgcactccgaaccaaacacaagcgacaca
aatgcacaaactgtctcaggcacagccacacagacagacgatgcagcacagactgacgga
cagcaacagacacaatcctctgaaaacacagacaacaaatcacagcccaaacggctgcat
gtctcaaatatacccttcagattccgggatccggatctcagacaaatgtttgggcaattt
ggtaaaatcttagatgttgaaattatttttaatgagcgcggctcaaaggtcaaaagaatg
aaacgttctagatttcagccaaaaattatcaacgaccctagtgttgcatgcgaaacaaac
aaaaaaaaagagaaatgtttctttgctccacaatggcatgtaccaacaaccaatgttcta
gaacagggatttggtttcgttactttcgaaaatagtgctgatgcggaaagggcgagggag
aaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataatgcaacagctcgc
gtcatgacaaataagaagactgtcaacccctatacaaacggttggaaattaaatccagtt
gtgggtgcagtctatagtccagaattctatgcaggcagggtgttgctgtgccaagcaaac
caggaaggatctcccgtatacagtgcccccagttcactagtatacacatccacaatgccg
ggtttcccctatcctgccgcaaccgcagctgctgcgtacagaggggctcatctccgaggc
agaggccgtaccgtctacaacacgttccgtgcggcggccccaccacctccaatcccggct
tatggcggtgttgtttaccaggatggattttatggtgcagacatttatggtggttatgct
gcctaccgatatgcccagcctaccacagccaccgcagctgcctacagtgacagttacgga
cgactttatactgcagacccctaccaccacacacttgctccagcaaccacctacggcgtt
ggtgccatgaatgcttttgcacccttgactgatgccaagactaggagccatgctgatgat
gtcggtctcgttctttcttcattgcaggctagtatataccgagggggatacagccgtttt
gctccatactaa
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