Sceloporus undulatus (fence lizard): 121921478
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Entry
121921478 CDS
T07740
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121921478 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121921478 (DDX46)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121921478 (DDX46)
Spliceosome [BR:
sund03041
]
Complex A
U2 snRNP components
U2 related factors
121921478 (DDX46)
Complex B
121921478 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
121921478
NCBI-ProteinID:
XP_042305556
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All DBs
Position
2:complement(98735270..98782098)
Genome browser
AA seq
1050 aa
AA seq
DB search
MGRESRSTKQQLSKQKQHYRKRSSSRGRSGSRSRSRSPSDKRVKRGDDRRSRSRERDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
NKKVEDRSRSKEKVEGVEVNKEKKKEKEDKEEEKDKDVNNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVKTKKASPETEKKKGELMVNDQD
AMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYETYRKNFYVEVPELAKMTQEEV
NAYRLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPIAVIMTPTRELALQITKECKKFSK
TLGVRVVCVYGGTGISEQIAELKRGAEVIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC
SDVEQNVIVIEEENKFLKLLELLGHFQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLH
GGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLTLVINYSCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQVRYAGDIIKALELSGTPVPPELEKLWTDFKDQQKAEGKTIKKS
SGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDM
ASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQRNLGAEAQVLVSFQFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDF
PQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtccagatcaacaaagcaacagttgtccaaacaaaaacagcattatcga
aagcgctcctcttcacgggggcgctctggtagtcgttcacggagtcgttctccatctgac
aaaagagtgaaacgtggagatgatagacgttctagaagtagggaaagagatcgcaggcgt
gagaggtcacgaagcagggataaaaggagatcccgatctcgtgacagaaagcgtgtaagg
cgctcaagaagtagagagagggaacggagcagagagaggcgacgctcacgtagtcgagag
agaagaagatctagaagccgaagccgagggagacggtctcgatcttccagccctggcaag
aacaagaaagtggaagacagatcacgctctaaagaaaaggtagaaggtgtggaagttaac
aaagaaaagaaaaaagagaaagaggacaaggaagaagaaaaggataaagatgtaaacaat
tttgatcagaacaagctagaagaggaaatgagaaaacgaaaagaaagagtagagaagtgg
agagaagaacaacgcaagaaagctatggaaaacataggagaactgaagaaagaaattgaa
gagatgaaacaggggaagaagtggagcttagaagatgatgatgatgatgatgaagaaact
gcagaaggggaaaaggaaggtaatgagattgaagatgaagagttagatccattagatgca
tatatggaagaagtaaaagaagaggtcaagaaatttaatatgcgaagtgtcaaaggtgga
ggtggaagtgaaaagaaatctggcccaacagttactaaagtagtaactgtggtgaaaacc
aaaaaagcatctccagaaacagaaaagaaaaaaggagaactcatggtgaatgatcaagat
gcaatggagtattcctctgaagaggaagaagttgatcttcagactgcattgactggttat
cagaccaaacataggaaattgctggaaccagtggatcatggaaagattgaatatgagaca
tacaggaaaaacttctatgttgaagttccagagctagctaaaatgacccaagaagaggtg
aatgcatatcggttggaaatggaagggattactgtcaagggtaaaggatgtcccaagcca
atcaaaacttgggtgcaatgtggtatttctatgaaaatcctgaattccctgaaaaagcat
gggtatgaaaagcccactcctatccaagcccaagctatacctgcaattatgagtggacgt
gatttaattggcatcgctaaaactggaagtggaaagactattgcttttttgttgcccatg
ttcagacacattatggaccagagaccattagaagaaggggaaggtccaatagcggtcatt
atgactcctactcgagaactggcgttacagattacaaaggagtgtaagaagttctcaaag
actcttggagttagagtggtgtgtgtatatggaggaacgggaataagtgaacagattgct
gaactgaaaaggggtgctgaagtaatcgtttgcacacctggccgtatgattgatatgtta
gcagccaataatggtcgggtgacaaatcttcggagagtaacgtatgttgttcttgatgaa
gctgatagaatgtttgatatgggctttgagcctcaggttatgcgcattgtagacaatgta
agacctgatcgccagactgttatgttctctgctaccttccctagagccatggaggctttg
gctcgtcgaatactaagtaagccaattgaggtccaggttggtggtaggagtgtcgtctgt
tctgatgtggagcagaatgtgattgtgatagaggaagagaacaaattcttgaagctactt
gaattactaggacactttcaagaaaagggatctgtcatcatctttgtagataaacaagaa
catgctgatggattgctgaaagatttaatgagagcttcttatccttgcctgtcacttcat
ggaggcatcgaccagtatgacagagacagtataatcaatgattttaagagtggagtatgc
aaacttcttgtggccacatctgtagcagcccgaggtcttgatgtaaaacatcttacgctt
gtaatcaactacagctgtcccaatcattatgaggattatgtgcacagggcaggcagaact
ggacgagcaggaaacaaagggtacgcatatactttcataactgaagatcaggtacgctat
gctggagacataatcaaagctttggagttgtcaggtactccagttcctcctgagctggag
aagctgtggactgacttcaaagatcaacagaaggctgaagggaagacaattaaaaagagc
agtggattctctggtaaaggattcaagtttgatgaaacagaagaggctttggcaaatgaa
cgaaagaaactacaaaaagctgcacttggcctgcaggattcagatgatgaagatacagct
gttgatattgatgagcagattgaaagcatgttcaattcaaagaaaagagtgaaggacatg
gcatcttctggtgggacatctaatgttcctgccccaacagcaggaaatgcagaaaaatta
gagattgctaaaagattggcattgagaatcaatgcacagaggaatcttggagccgaggca
caagtattggtctcttttcaatttaaggatgtgatgcagcaagctacgaatgctatcctg
agaggaggtactattcaggctccaactgtatcagccaagactattgcagagcaactggca
gagaagatcaatgctaagctcaattatgtgccaatagagaaacaagaggaggagaaacag
gaagggggacaaaatgaatcttttaaaagatatgaggaagaactggagatcaatgatttc
ccacagactgctaggtggaaggtaacatcaaaggaagcactgcacagaataagtgaatat
tctgaagctgccattacaatcagaggaacatactttcctccaggcaaagagcccaaggaa
ggagaacgaaaaatttatttggccattgagagtgccaatgaattggctgtacagaaagca
aaggcagaaatcactcggcttatcaaagaagagctaatcagattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttttgtaa
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integrated database retrieval system
