Sceloporus undulatus (fence lizard): 121928424
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Entry
121928424 CDS
T07740
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03250
Viral life cycle - HIV-1
sund04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121928424 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121928424 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121928424 (SAMHD1)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121928424 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
SAM_Ste50p
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
121928424
NCBI-ProteinID:
XP_042319026
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All DBs
Position
4:complement(42683315..42721308)
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AA seq
640 aa
AA seq
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MSNRSREAAPKRACPTSPADDHGLHTPEKRSTTPFAEARAAPGPSGGLLHPREWDTERLC
AFLRGRGFGDAALLRGFRENSITGSCLPYLTESRLEKIGIQKMDVRVKILNCLHKLAQSH
AVIMKVFNDPIHGHIEMHPLLVKIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGV
SHLAGRLVRELQERQPELDINHRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGYPW
KHEKASVQMFEHLITSNNLRPDMEYYGLQLNEDIDFIKEQIAGPIEPKKDDSSWSYQGRT
AEKSFLYEIVANKRSGIDVDKWDYFARDCHHLGIQNNFDYERFIKFARVCQVKNKKHICT
RDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIRIKGSCGKEYKMST
ALEDMEAYTKLTDEIFLKILHSDQPELEDAQEILRKIERRDLYKYLGQTQPPEGKEITKE
QYDSLSSEIVASKPAKFPEDAELKAVVLKAEDFIVDVINMDYGMKEKNPVNNVRFYCKSD
ITKAIKITKEQVSKLLPEKFAEQLIRVYCKKTDEKIICIATKHFIQWCINKDFTKPQDGD
VVAPELTPLKRDWNDDEDDYQHNSKENTNSSKIRNRLFND
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgcagccgggaagccgcccccaagcgggcgtgccccaccagcccagccgac
gaccatgggctgcacacgccggagaagcgcagcaccacccccttcgcggaggctcgggcg
gcgccgggccccagcggcgggctgctccacccgcgagagtgggacacggagcgcctgtgc
gcgttcctccgcggaaggggcttcggggatgcggcgctgctgaggggcttccgagaaaat
agtatcactggttcatgtttgccctacctcacagaatctcgtcttgaaaaaatcggaatt
caaaagatggatgtgagagtaaagattctgaattgtctgcacaaactggcacaaagtcat
gctgttataatgaaggtatttaacgaccctatccacggtcacattgaaatgcatcctctt
cttgttaaaataattgacacacctcagtttcagcgcctccgatacattaaacagttgggt
ggaacttactatgttttcccaggagcttcacacaaccgttttgaacattcccttggagtt
agccatctggcaggccgtttggttcgggaattgcaagagcgacagcccgagttggatatt
aaccacagggatattttgtgtgttcagattgctggtctctgtcatgatttgggtcatgga
ccattctcacatatgtttgatggaagattcatcccacttgctcgcccaggatacccatgg
aagcatgaaaaagcttctgttcagatgtttgagcacttaatcacttccaacaatctgagg
cctgacatggaatattatggtctccagctgaatgaagatatagactttatcaaagaacag
atagcaggacccattgagccaaaaaaagatgactcttcttggtcttaccaagggcgaact
gcggaaaaaagttttctctatgagatagtggctaacaaaagaagtggcattgatgttgat
aaatgggattactttgccagggactgtcatcatcttggaattcagaataattttgattat
gagcggttcattaaatttgctcgagtttgtcaagtgaaaaataagaagcatatttgtaca
cgtgacaaggaggttggcaatctttatgacatgttccacacacggaattgcctgcaccgc
agagcctatcaacacaaagttgggaacatcattgaaaccatgattaccgatgccttctta
aaagctgatccctatatcagaataaagggttcttgtgggaaagaatacaaaatgtctaca
gcactggaagatatggaagcatacactaagttaacagatgaaatttttctaaagattcta
cactctgatcaaccagagctggaagatgcacaggagattttgcgtaaaatagaacggcgt
gatctctataaatacctcggacagactcagcctccagagggcaaggagattacaaaagag
cagtatgacagcctgtcttctgaaatagttgcatctaagccagcaaaattccctgaagat
gctgaattgaaggctgttgtattgaaggctgaagactttattgttgatgttatcaatatg
gattatggaatgaaagagaagaaccctgtcaataatgttcgtttctactgtaagtctgac
attactaaagcaatcaaaatcactaaggaacaagtttcaaaacttctaccagaaaaattt
gctgaacaactgattagagtttattgtaagaaaacagatgaaaaaattatttgtattgcc
acaaaacattttattcagtggtgcataaacaaggatttcactaaaccacaggatggtgat
gtggttgccccagaacttactccactgaagagagactggaatgatgatgaagatgattac
cagcacaattcaaaggaaaacactaacagttcaaagatcagaaacagactttttaatgac
tga
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