Superficieibacter sp. HKU1: P0H77_14540
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Entry
P0H77_14540 CDS
T08896
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
supe
Superficieibacter sp. HKU1
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_14540
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
P0H77_14540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
UPF0547
AAA_16
zf-tcix
SLFN-g3_helicase
zinc_ribbon_2
zf-ribbon_3
AAA_22
DZR
Motif
Other DBs
NCBI-ProteinID:
WES66862
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Position
3031132..3032892
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AA seq
586 aa
AA seq
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MTFTLRPYQREAVDATLAHFRQHQEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVEQNHAKYLALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLEAFQGEFSLLIVDECH
RISDDTDSQYQQILAHLSAANPRLRLLGLTATPFRLGKGWIYRFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRVTPH
IISQIIEFAATRKGVMIFAATVEHAREIVGLLPASEAALITGETPGAQRDELISAFKAQQ
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDYRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCGGMT
LQHGADEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGVPLRWITA
ADIVAQQPLLRHPDFVVARKKGQYWQVREKLFDYAGRYRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacctttactcttcgcccttatcaacgggaagcggtggatgccaccctcgcccatttc
cgccagcatcaggaaccggccgttatcgtgttgcccacgggggccggaaaaagcctggtc
attgccgagctggcaagggtggcgcgtgggcgcgtgctggtgctggctcacgtcaaagaa
ctggtcgagcaaaatcacgccaaatacctggcgctggggctggaggcggatattttcgcg
gcgggcctgaagcgtaaagagagccacggcaaagtagttttcggcagcgtgcagtcggtg
gcacgtaatctggaggcgttccagggtgaattttccctgctgatcgtcgatgaatgccac
cggatcagcgacgatacggacagccagtatcagcaaattctggcgcatttatccgccgcc
aaccctcgtctgcggctgctggggttgaccgcaacaccttttcgtctcggcaaaggctgg
atttatcgttttcactatcacggcatggtgcgcggcgatgaaaaagcgctgtttcgcgac
tgtatttatgaactgccgctgcgctatatgattaaacacggctacctgacgccgccggag
cggctggatatgccggtggtccagtatgatttcagccgccttcaggcccaaagtaacggc
ctatttagcgaggcggatcttaaccgcgagctaaaaaaacagcagcgcgttacgccacat
atcatcagccagattatcgagttcgccgcgacgcgcaaaggcgtgatgatttttgccgcc
accgtggagcacgcgcgggaaattgtcggcctgctgccagccagcgaagcggcgctgatt
accggtgaaaccccgggcgcacagcgtgatgaattgattagcgcctttaaagcccaacag
tttcgatatctggtcaatgtgtcggtactgacgaccggattcgacgcgccgcacgtcgat
ttgattgccattttgcgccctaccgagtccgtcagcctgtatcagcaaattgttggacgc
ggattgcgtctgtcgccgggtaaaaccgattgcctgatcctcgactacgcgggcaatcca
catgatttgtacgctcctgaggtgggagcgccgaaaggcaaaagcgataacgtcccggtg
caggtgttttgtccagcctgcggctttgccaacacgttctgggggaaaaccaccgccgac
ggcacgctgattgagcacttcggccgccgctgtcagggctggtttgaagatgatgaaggg
catcgcgaacagtgcgattaccgctttcgtttcaaaaattgcccgcagtgtaacgcggag
aatgatatcgctgcccgccgctgtcgtgagtgcgatacggtgctggtcgatcccgatgac
atgctgaaggcggcgctgaagttaaaagatgcgctggtcttgcgctgcggcggcatgacc
ctgcaacacggggccgatgagaaaggcgaatggctgaaaattacctactacgatgaggat
ggagccgacgtcagcgagcggttccgtctgcaaacgcctgcgcagcgaaccgcctttgaa
cagctgtttattcgtccgcatacgcgcacgcccggcgtgccattacgctggatcaccgcc
gccgatatcgtggcgcaacagccgttgctgcgccatcccgattttgtagtcgcgcgtaag
aaaggtcagtactggcaggtgcgcgaaaaactgtttgattacgccggacgttaccgccgc
gccaatgaattgcgcggttag
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