Staphylococcus aureus subsp. aureus TCH60: HMPREF0772_11069
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Entry
HMPREF0772_11069 CDS
T01889
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
suq
Staphylococcus aureus subsp. aureus TCH60
Pathway
suq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0772_11069 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suq03021
]
HMPREF0772_11069 (rho)
03019 Messenger RNA biogenesis [BR:
suq03019
]
HMPREF0772_11069 (rho)
Transcription machinery [BR:
suq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HMPREF0772_11069 (rho)
Messenger RNA biogenesis [BR:
suq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF0772_11069 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Spore_III_AA
Mor
ATPase_2
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
ADQ76531
LinkDB
All DBs
Position
1144867..1146198
Genome browser
AA seq
443 aa
AA seq
DB search
MGVNYMPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQM
EKDGNYYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKP
KDNEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETETQNYSTRIMDLVTP
IGLGQRGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAE
VVHSTFDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLS
GGLDPASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLD
RKLSERRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKRSKN
NEDFFKQLQKSAEESTKTGRPII
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaactatatgcctgaaagagaacgtacatctcctcagtatgaatcattccac
gaattgtacaagaactatactaccaaggaactcactcaaaaagctaaaactcttaagttg
acgaactatagtaaattaaataaaaaagaacttgttctagctattatggaagcacaaatg
gaaaaagatggtaactattatatggaaggtatcttagatgatatacaaccggatggttat
ggttttttaagaacagtgaactattctaaaggggaaaaagatatttatatatctgctagc
caaattcgtcgttttgaaattaaacgtggggataaagtaactgggaaagttagaaaacct
aaagataacgaaaaatattatggcttattacaagttgactttgtcaatgaccataacgca
gaagaagtgaagaaacgaccgcatttccaagctttgacaccactttatccagatgagcgt
attaaattagagacagaaacacaaaattattcaacgcgcatcatggatttagtaacaccg
attggtttaggtcaacgtggtttaatagtggcgccacctaaagcaggtaaaacatcgtta
ttaaaagaaatagcgaatgcaatcagtacgaacaaaccagatgcaaagctatttattttg
ttagttggcgagcgtcctgaagaggtaacggatttagaacgctcagtagaagctgctgaa
gtcgttcattcaacgtttgacgaaccaccagaacaccatgttaaagtagctgaattatta
cttgagcgtgcaaagcgtttagtagaaattggggaagatgtcattattttaatggattct
ataacgagattagcacgcgcttataacttagttattccaccaagtggtcgtacattatca
ggtggtttagatcctgcatctttacacaaaccaaaagcattcttcggtgcagcgagaaat
attgaagcgggtggaagtttaacaatacttgcaactgcattagttgatacgggttcacgt
atggacgatatgatttacgaagaatttaaaggaacaggtaacatggagttacatttagat
cgtaaattgtctgaacgtcgtatcttccctgcaattgatattggcagaagttcaacgcgt
aaagaagaattgttgataagtaaatctgaattagacacattatggcaattaagaaatcta
ttcactgactcaacagactttactgaaagatttattcgcaaacttaaaaggtctaagaat
aatgaagatttcttcaagcagctacaaaagtctgcagaagaaagtactaaaacgggtcga
cctataatttaa
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