Stigmatella aurantiaca: STAUR_5252
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Entry
STAUR_5252 CDS
T01425
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sur
Stigmatella aurantiaca
Pathway
sur03030
DNA replication
sur03430
Mismatch repair
sur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAUR_5252 (holB)
03430 Mismatch repair
STAUR_5252 (holB)
03440 Homologous recombination
STAUR_5252 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sur03032
]
STAUR_5252 (holB)
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_5252 (holB)
Enzymes [BR:
sur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAUR_5252 (holB)
DNA replication proteins [BR:
sur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAUR_5252 (holB)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAUR_5252 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ADO73023
UniProt:
Q08Y55
LinkDB
All DBs
Position
complement(6503959..6504990)
Genome browser
AA seq
343 aa
AA seq
DB search
MTLASVVGQPRAMDALQAALRSGSVHHAYLFAGPEGVGKELAAVGLAQALTCPEQPGVGC
GACPSCLRIGKGLHPDVTWVMPDEERVARGLAGRSDFTGTPSREIRVEQIRGLQERLALR
GLESRRKVALIVSAQTMNVQAQNAFLKTLEEPPSDTTLILVASAVDRLLPTIRSRCGKVH
FGPLPVELVAQRVQQERRLDPPTAALAAVMAGGSLGRALGLDLEVLAQRKDIITRFEALR
PDNALPLLRFAEEYGASREEAEQALTLLTLWTRDVARVRAGAGGMANMDLGELAQEVAAR
THETELHRRHALLERAQGALQRNGSPRLHLERMLLDMLMREVR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgttggcttcggtggtgggacagcctcgggcgatggatgctctccaggcggccttg
cgcagcggatcggtgcaccacgcctacttgttcgctgggccagagggcgtgggcaaggag
ctggcggcggtggggctggctcaggcgctcacctgtccggagcagcccggggtggggtgt
ggggcctgcccgagctgcctgcgcatcggcaaggggctccacccggatgtgacgtgggtc
atgccggatgaggagcgggtggcccgggggctcgcggggcgctcggatttcaccggcacg
cccagccgggagattcgcgtggagcagatccgcgggctgcaggagcgcctggcgctgcgc
gggctggagtcccgccgcaaggtggcgctcatcgtctcggcgcagacgatgaacgtgcag
gcgcagaatgccttcctcaagacgctggaggagcctccctcggacaccacgctgatcctc
gtcgcctccgcggtggaccggttgttgcccaccatccgcagccgttgcggcaaggtgcac
tttggcccgctgccggtggagctggtggcccaacgtgtgcaacaggagcgccggttggat
cctcccaccgccgcgctcgccgcggtgatggcgggtggcagcctgggccgcgcgctgggg
ctggatctggaggtgctggcccagcgcaaggacatcatcacccgcttcgaggccctccgg
ccggacaacgccctgccgctgctgcgcttcgcggaggagtacggggccagccgagaggag
gccgagcaggcgttgacgctgctgacgctctggacgcgggacgtggcccgggtgagggcc
ggggcgggaggcatggcgaacatggatctcggggagctggcgcaggaggtggcggcgcgg
acccacgagacggagttgcaccgccgccatgcgctcctggagcgcgcgcagggggcgctt
cagcgcaacggctctccccggctgcacttggagcggatgctgctcgacatgttgatgcgg
gaggtccggtga
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