Sporosarcina ureae: SporoP32a_01900
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Entry
SporoP32a_01900 CDS
T04877
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sure
Sporosarcina ureae
Pathway
sure03410
Base excision repair
sure03430
Mismatch repair
sure03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SporoP32a_01900
03430 Mismatch repair
SporoP32a_01900
03440 Homologous recombination
SporoP32a_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sure03400
]
SporoP32a_01900
DNA repair and recombination proteins [BR:
sure03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SporoP32a_01900
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SporoP32a_01900
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SporoP32a_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ARK20405
LinkDB
All DBs
Position
complement(374081..376426)
Genome browser
AA seq
781 aa
AA seq
DB search
MIQSKKRWKIDRPDEELVNQLAKDLKLSTMLTKILVSRGITTSEQANAYLYMDETNLHDP
FLFHDMQKAVDRIKQAIDTQKKITIFGDYDADGVTSVTVLTTALERLGAKVNFAIPNRFE
HGYGPNSDYFEQLHIDGTEVLITVDNGISGVEQIAFAKSLGMTIIVTDHHEMGEVLPDAD
AVIHPRHPEGNYPFGELAGVGVAFKLASALLGEPPLDLLEFVAIGTIADLVPLEDENRYM
VKEGIRRLRRTQRSGIKALMQVSGHDQNALSEETIGFTIGPRLNAPGRLGDADVAVELLK
SDNDQQALGIAESLNDLNKERQQLVKEIAKEAEEQVEIRYGDQIPHVLVVEGEGWNPGVV
GIVSSRLTEKHYRPSIILSLDHETGIAKGSARSIEGFDLYKELSKNASILPHFGGHAMAA
GMSLKIEDVELLRSNLNEQARDVLTEEDLQPILSIDVPLSMNEIDIASIEALEKIRPFGM
GFPKPVFLLEDLDTISVRKIGTAKDHLKLEMGDHGERLDAIYFGAGALADEMAPQSKLSL
TGDLQINEWNGNKKAQLLVGDVKCDEWQLFDYRGIREPARWLPMIPDKAQFIAFSEEAIQ
HFAPFFKEVPIALIGRDEVYPSSAIVLLDMPQAKEQLKLVMEKTLADRVYLHLHVHDSMY
FEKMPDRQQFGWYYSFLKKRETFDMYNQIEMLSKHKGWKKDVIKFMTKVFYELEFVTLEN
GKVTMLESAGKRDLAEAPSYKKRQQQIKLEELLLYAPYQDLKKVFDSLRETDAVEEEKLW
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgatacaatccaaaaaaagatggaaaatcgatcggcctgatgaagaacttgtcaaccag
ctcgcgaaagacttgaagctatccacgatgctgaccaaaatacttgtctcgcgcggtatc
acgacaagcgaacaagcaaacgcgtacttgtacatggacgaaaccaacctacacgacccg
tttttattccatgacatgcaaaaagctgttgaccgtattaaacaagccatcgacacacag
aaaaaaattacaatatttggagattatgatgcggacggcgtaacaagcgtaaccgtgtta
acgacagcacttgaacgtctcggtgctaaagtgaactttgccattccgaaccgatttgaa
catggttatggaccgaatagcgactactttgaacaactacatatagacggaaccgaagtc
ctcattaccgttgataacggaatttcaggcgtcgagcaaatcgcattcgcgaagtcgctt
gggatgacgatcatcgtaacggatcaccacgaaatgggcgaagtattgcctgatgcggac
gcagtcattcatcctcgtcatccggaaggcaattatccattcggagaacttgcgggggta
ggtgtagcgttcaaactcgcttctgcgctacttggagagccacctctcgacttgttagaa
tttgtcgcaatcggcaccattgcagatttggttccgctagaagatgagaaccggtatatg
gtgaaggaaggaattcgcaggttgcgtcgcacgcagcgttcgggaattaaagcattgatg
caagtgagcggacatgaccagaatgcattatcggaagaaacgattggctttacgataggt
ccacgcttaaatgcacctgggcgactcggtgatgcggacgtcgctgtggagttattgaag
tctgacaatgatcaacaagcgctcggaattgcggagtcattgaatgatttgaataaagaa
aggcaacaattggtgaaagagatcgcaaaagaggcggaagaacaagtggaaattcgctat
ggcgatcaaattcctcacgttttagtcgtcgaaggtgaaggttggaatccaggtgttgtc
ggtatcgtgtcgtcgaggttgacggagaaacactaccgtccttccatcattttgtctctt
gaccatgagacagggatcgcaaaaggttctgcccgcagtatcgaaggctttgatttgtat
aaggaattgtcgaagaatgcatcgattctgccacatttcggtgggcatgcgatggcggct
ggaatgtcattgaaaatagaagatgtcgaattattgcgttcgaatttgaatgaacaggcg
agagatgtgttgacggaagaagaccttcagcctattttatcgatcgatgtaccgctgtcg
atgaatgaaattgatattgcgtccatcgaagcacttgagaaaatccgaccatttggtatg
gggttcccgaagcctgttttcttgcttgaagatctagatacgatatctgtccgcaaaatc
ggtacagcgaaagatcatctaaaactggaaatgggtgatcacggtgagcgactggacgcg
atttatttcggagcgggtgcattggcagatgaaatggcaccacagagtaagttgagtttg
acgggtgatttgcagatcaatgaatggaacggcaataagaaagcgcagttgcttgttggt
gacgtaaaatgtgacgaatggcagttgtttgattatcgtggaattcgtgaaccggctaga
tggttgccgatgattccagataaagcgcaattcattgcgttcagtgaagaagccattcag
catttcgcaccattctttaaagaagttccgattgctttgatcggacgcgatgaagtgtat
ccgtcttccgcgattgttttgctcgatatgccacaggcgaaagaacagttgaagctagtg
atggaaaagacgcttgctgaccgtgtctatctacatctacatgtgcatgattcgatgtac
ttcgaaaagatgcccgaccgccaacaatttggttggtattacagctttttgaaaaagcgg
gagacatttgatatgtacaatcaaatcgaaatgctttcaaaacataaaggttggaaaaaa
gacgtaattaagttcatgacaaaagtgttttatgaactagaatttgttacactagagaat
ggtaaggtgacgatgctagaatctgccggcaaacgtgatttggcagaagcaccatcctat
aaaaaacgccaacagcaaattaaactagaagagttattgctttatgctccgtatcaggac
ttaaagaaagtattcgattctttacgtgagacagacgctgttgaggaggaaaaactgtgg
acttaa
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