Sutterella megalosphaeroides: SUTMEG_06960
Help
Entry
SUTMEG_06960 CDS
T05697
Symbol
mfd
Name
(GenBank) transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sutt
Sutterella megalosphaeroides
Pathway
sutt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sutt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SUTMEG_06960 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sutt03400
]
SUTMEG_06960 (mfd)
Enzymes [BR:
sutt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SUTMEG_06960 (mfd)
DNA repair and recombination proteins [BR:
sutt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
SUTMEG_06960 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
UB2H
AAA_30
Glyco_tran_WecG
ERCC3_RAD25_C
Methyltransf_8
Motif
Other DBs
NCBI-ProteinID:
BBF22805
UniProt:
A0A2Z6I8L7
LinkDB
All DBs
Position
complement(830873..834355)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTSESTSRTDTRPSSHFSADLFSFAPGTKYRLTLPATASDASAVAEAGLEARRRGERILV
VCADPANVRRLTQECAWFAPEADVRALPDWETLPYDTLSPQEDLVSERLETFYRLTSGTG
GADILVASAVTAAQRMAPVAFVGANTFLLRRGDRISIERLRENLVRAGYAAVKQVLAAGE
FSVRGSIVDVYPMGSDNPFRLDLFDDEIDSIRWFDVDTQRSMEVVEEIRLLPGHEFPVTA
EALALFRQRWRTVFAGDPKKSIVYTDAEKGVLSPGIEYYLPLFFDETATLADYLPESTRV
LLLGDVAKALRDFRADMTSRAKIFAADTARPSLPPEALWLSDEEFFVSLGRFARFPVERP
ADPNAEGRLAGATVDRKNPKPLANLENFAAAEKARGRRVLIAAPSAGRFETIGELLRAGG
LKVEEYADWESARAGEAPLGLTIAPLYAGALFESITLLTETELYAASPRRSRSRRTRTAN
SIEMMVRDVAELKVGDAVVHVDHGIGRYRGLVHMETGEGESEFLEIEYKKEARLYVPITN
LHLISRYSGNDPANAPLHALGRGDWEKAKRKAAEEVRDTAAELLHLYALRKSRAGEVFRV
DPVEYEVFREGFAFDETPDQAAAIEAVIGDMTSGKAMDRLVCGDVGFGKTEVALRAAFVA
VMSGKQVAVLCPTTLLAEQHAATFRDRFANWPVTVAELSRFRTGKETAKTIEGIAAGTVD
IVIGTHKLLSEKVAFNKLGLVIIDEEHRFGVRQKEALRKIRAEVDVLTLTATPIPRTLSM
SLEGIRDFSVIATAPERRLSVKTFVQGEQEGLIREAILRELKRGGQVYFLHNEVETIENR
RERLERLVPEARIVVAHGQMSERELERVMREFYQQRYNVLLCTTIIETGIDVPTANTIII
ERADKLGLAQLHQLRGRVGRSHHQAYAYLLTPPDGAYTKDAKKRLEAIQSLEELGSGFYL
AMHDLEIRGAGEVLGEHQSGEIAEVGYELYNRMLMSAVKALKRGEALDLDAPLRTTTEIN
LHAPALLPSDYVSDVSQRLAYYKELASAEDRLGLERTHEAIVDRYGKLPDAAKRLILVHR
LRLRCEKLGIRKIDAAPAATVITFEPKTTVEPMAVVKFLQRRKEARMAGPDRLRVEVGGA
DPEKRAALVATFLDELEGRA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgaatcgacctcccgcaccgacacccgtccgagttcgcacttttccgccgac
ctcttctcgtttgctccggggacgaagtaccgcctgacgcttcccgccacggcaagcgac
gcttcggctgtcgccgaagcgggcctcgaagcgcgtcggcgcggcgaacggattctcgtc
gtgtgcgcggaccccgcgaacgtgagacgtctcacgcaggaatgcgcctggttcgcgccc
gaagcggacgtgcgggcgctgcccgactgggaaacgcttccctacgatacgttgagtccg
caggaagacctcgtatcggaacgcctcgaaaccttctaccgactgacgagcggcaccggg
ggcgcggacattctcgttgcctccgccgtcacggccgcgcaacgcatggcgcccgtcgcg
ttcgtcggagccaacaccttccttttgcgtcggggcgatcggatttcgatcgaacggctt
cgcgaaaacctcgtccgggcgggctacgccgccgtgaagcaggtgctcgcggcgggggaa
ttctccgtgcgcgggagtatcgtcgacgtctacccgatggggtccgacaaccccttccga
ctcgatcttttcgacgacgaaatcgactcgatccggtggttcgacgtcgacacgcagcgc
tcgatggaagtcgttgaggaaatccggcttctccccgggcacgaattccccgtaacggcc
gaagcgctcgcccttttccggcagcgctggcgcacggtctttgcgggcgaccccaaaaag
agcatcgtctatacggacgccgaaaaaggagtgctgagcccggggatcgaatactacctg
ccgctctttttcgacgagacggccacgctcgccgactaccttcccgagtcgacccgcgtg
ctgcttctcggcgacgtcgcgaaggcgcttcgcgactttcgcgccgacatgacgagtcgc
gcgaagattttcgccgcggacaccgcacgcccgtccctgccgcccgaggcactgtggctt
tcggacgaagaatttttcgtgagtctcgggcgcttcgcgcgctttcccgtcgaacggccc
gcggacccgaatgccgaagggcgcctcgcgggcgcgacggtcgaccgaaagaacccgaag
cccttggcgaacctcgaaaacttcgcggctgcggaaaaagcccgcggtcggcgcgttctc
attgccgcgccctcggcgggacggttcgaaacgatcggagagctcctgcgcgcgggcggt
ctcaaggtcgaggaatacgccgactgggaaagcgcccgggcgggcgaggccccgctcggc
ctgacgatcgcaccgctttatgcgggggcgctctttgaaagcatcacgctcctcaccgaa
acggaactctacgccgcgagcccccggcgcagtcgttcgcgccgcacccgcacggcgaat
tccatcgaaatgatggtgcgcgacgtggccgaactcaaagtgggcgacgcggtcgtgcac
gtcgaccacgggatcgggcgctaccgcggactcgtgcacatggaaacgggcgaaggcgag
agtgaattcctcgaaatcgaatacaaaaaggaagcgcgactttacgtgccgatcacgaat
ctgcatctcatttcacgctactccgggaacgatcccgcgaacgctccgctgcacgcgctc
gggcgcggcgactgggaaaaggcgaaacgcaaagccgccgaagaagtgcgcgacaccgcg
gcggaactcttgcatctctacgcgcttcgcaagagtcgtgcgggcgaagtcttccgggtc
gatcccgttgagtacgaagtcttccgcgaaggctttgcctttgacgaaacgcccgaccag
gcggccgcgatcgaggccgtgatcggagacatgacgtcggggaaggccatggaccggctc
gtctgcggggacgtgggcttcgggaagaccgaagtcgcgctgcgcgcggcgttcgtagcc
gtgatgagcggaaagcaagtcgccgtcctctgcccgacgacgcttttggccgaacagcac
gccgcgaccttccgcgaccgctttgcgaattggcccgtgacggtggcggaactttcgcgc
tttcgtaccgggaaagaaaccgcgaagacgatcgaagggattgccgcggggacggtcgac
atcgtgatcgggacgcacaagcttctttccgaaaaggtcgccttcaacaaactgggcctc
gtcatcatcgacgaggagcaccgcttcggcgttcgtcaaaaagaggcgcttcgcaagatc
cgtgccgaggtggacgttttgacgctcaccgccacgccgattccgcgcacgctctcgatg
agtcttgagggcatccgcgacttttccgtgatcgccaccgcgcccgaacgacgcctttcg
gtgaagaccttcgtgcagggcgagcaggaagggctcattcgcgaagcgattctccgagaa
ctgaagcgcggcggtcaggtttatttccttcacaacgaagtcgagacgatcgaaaaccgg
cgcgagcgcttggagcggctcgtgcccgaggcgcgcatcgtggtcgcacacgggcagatg
tcggagcgcgaactcgagcgggtgatgcgcgagttttaccagcagcgctacaacgtgctt
ctttgcacgaccatcatcgaaacggggatcgacgtcccgaccgccaacacgatcatcatc
gagcgtgcggacaagctcgggctcgcgcagcttcaccagttgcgcggccgcgtcgggcgc
tcccaccaccaggcctacgcctaccttctgacgcctcccgacggcgcctacacgaaggac
gcgaaaaagcgcctcgaagcgattcagtccttggaagagctcggttcgggcttttacctc
gccatgcacgacttggaaatccgcggtgcgggcgaggtgctcggcgaacaccagtcgggg
gaaatcgccgaagtggggtacgaactctacaaccgcatgctgatgtcggccgtcaaggcg
ctgaagcgcggcgaagccttggaccttgacgcgcccttacgcaccacgaccgaaatcaat
ctgcacgcgcccgcgcttcttccctccgactacgtgtcggacgtctcgcagcgcctcgcc
tactacaaggagcttgcgagcgccgaagaccggctcggtctcgagcgcacgcacgaagcg
attgtcgaccggtacgggaaactgcccgacgccgccaagcggctcatcctcgtacaccgt
ctgcgcctgcggtgcgaaaagctcggcattcgcaaaatcgacgccgcgcccgccgcgacc
gtgatcacgttcgaaccgaagacgacggtcgaaccaatggcggtcgtgaaattcctccag
agacgaaaagaggcccgcatggcgggccccgatcggttgcgcgtcgaggtgggaggggcc
gaccccgaaaagcgcgcggcgctcgtggcgacgttcctcgacgaactcgagggacgcgcc
tga
DBGET
integrated database retrieval system
