Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA): SAEMRSA15_20290
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Entry
SAEMRSA15_20290 CDS
T02059
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
sux
Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA)
Pathway
sux03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sux00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAEMRSA15_20290 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sux03021
]
SAEMRSA15_20290 (rho)
03019 Messenger RNA biogenesis [BR:
sux03019
]
SAEMRSA15_20290 (rho)
Transcription machinery [BR:
sux03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SAEMRSA15_20290 (rho)
Messenger RNA biogenesis [BR:
sux03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAEMRSA15_20290 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Spore_III_AA
Mor
ATPase_2
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
CCG16740
LinkDB
All DBs
Position
complement(2198854..2200170)
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AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETETQNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKRSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaattgtacaagaac
tatactaccaaggaactcactcaaaaagctaaaactcttaagttgacgaactatagtaaa
ttaaataaaaaagaacttgttctagctattatggaagcacaaatggaaaaagatggtaac
tattatatggaaggtatcttagatgatatacaaccagatggttatggttttttaagaaca
gtgaactattctaaaggggaaaaagatatttatatatctgctagccaaattcgtcgtttt
gaaattaaacgtggggataaagtaactgggaaagttagaaaacctaaagataacgaaaaa
tattatggcttattacaagttgactttgttaatgaccataacgcagaagaagtgaagaaa
cgtccgcatttccaagctttgacaccactttatccagatgagcgtattaaattagagaca
gaaacacaaaattattcaacgcgcatcatggatttagtaacaccgattggtttaggtcaa
cgtggtttaatagtggcgccacctaaagcaggtaaaacatcgttattaaaagagatagcg
aatgcaatcagtacgaacaaaccagatgcaaagctatttattttgttagttggcgagcgt
cctgaagaggtaacagatttagaacgctcagtagaagctgctgaagtcgttcattcaacg
tttgacgaaccaccagaacaccatgttaaagtagctgaattattacttgaacgtgcaaag
cgtttagtagaaattggggaagatgtcattattttaatggattctataacgagattagca
cgcgcttataacttagttattccaccaagtggtcgtacattatcaggtggtttagatcct
gcatctttacacaaaccaaaagcattcttcggtgcagcgagaaatattgaagcgggtgga
agtttaacaatacttgcaactgcattagttgatacgggttcacgtatggacgatatgatt
tacgaagagtttaaaggaacaggtaacatggagttacatttagatcgtaaattgtctgaa
cgtcgtattttccctgcaattgatattggcagaagttcaacgcgtaaagaagaattgttg
ataagtaaatctgaattagacacattatggcaattaagaaatctattcactgactcaaca
gactttactgaaagatttattcgcaaacttaaaaggtctaagaataatgaagatttcttc
aagcagctacaaaagtctgcagaagaaagtactaaaacgggtcgacctataatttaa
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