Stella vacuolata: STVA_29990
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Entry
STVA_29990 CDS
T06335
Name
(GenBank) peptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
svc
Stella vacuolata
Pathway
svc00300
Lysine biosynthesis
svc01100
Metabolic pathways
svc01120
Microbial metabolism in diverse environments
svc01230
Biosynthesis of amino acids
Module
svc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STVA_29990
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svc01002
]
STVA_29990
Enzymes [BR:
svc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
STVA_29990
Peptidases and inhibitors [BR:
svc01002
]
Metallo peptidases
Family M20
STVA_29990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BBK42979
LinkDB
All DBs
Position
complement(3193658..3194902)
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AA seq
414 aa
AA seq
DB search
MDDLKRQLLSWLEADREELIGFMSGFLQAKSANPPGDTREAADHISRYLQARQVPHRFVA
AFDHMPNVVGTYECGGEGRHLVLNGHIDVFPAIDDYGWSGEVKDGKIFGRGASDMKTGTA
AGVFAYAYLHRLREHLKGKLTLTCVSDEQSGGKYGTRYLFETIPDEVKGDCCLNGEPSGI
NNIRFMEKGTLRFRVTVKAPGGHGGYPHLSANPVKIAAAIVGEMERFHGRRAPMPADIAA
ALDTPEAIAGTNRGMGDGAADVVRFITVNPGVIQGGLKVNQIAPDCMVEFDLRIPFGFDR
DEVLAEVRSIVGAHPEASMEMFDAHSYPPSAADPNGEMVRILQDNVKALKGFTPVPLSSL
GGSDSRYWRYDGIPAYLYGPSPVSMGRRDEHVTVEEFLHIVTTHVLSAFDYLRK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctgaagcgccagctgctttcctggctcgaagccgaccgcgaggagctgatc
ggcttcatgagcggctttctccaggcgaagagcgccaacccgccgggcgacacgcgcgag
gcggccgaccatatcagccgctacctccaggcccgtcaggtgccgcaccgcttcgtcgcc
gccttcgaccacatgccgaacgtcgtcggcacctatgaatgcggcggcgagggccgccac
ctggtgctgaacgggcatatcgacgtgttcccggcgatcgacgactatggctggtcgggc
gaggtcaaggacggcaagatcttcggccgcggcgcctcggacatgaagacgggcaccgcc
gccggcgtcttcgcctatgcctatcttcatcgcctgcgcgagcacctgaagggcaagctg
acgctgacctgcgtctccgacgagcaatcgggcggcaagtacggcacccgctacctgttc
gagaccatcccggacgaggtcaagggcgactgctgcctgaacggcgagccgtccggcatc
aacaacatccgcttcatggagaaggggacgctgcgcttccgggtgaccgtgaaggcgccg
ggcggccatggcggctatccgcacctgtcggccaacccggtcaagatcgccgccgccatc
gtcggcgagatggagcgctttcacggccgccgcgcgccgatgccggccgacatcgcggcc
gccctcgacactccggaggcgatcgccggcaccaacaggggcatgggcgacggggcggcc
gacgtggtgcgcttcatcaccgtcaatccgggcgtcatccagggcgggctgaaggtcaac
cagatcgcgcccgactgcatggtcgagttcgacctgcgcatccccttcggcttcgaccgc
gacgaggtgctggccgaggtccgctcgatcgtcggggcccatcccgaggcgtcgatggag
atgttcgacgcccattcctatccgcccagcgccgccgacccgaacggcgagatggtccgc
atcctccaggacaacgtgaaggcgctgaagggcttcaccccggtgccgctgtccagcctg
ggcgggtcggattcccgctattggcgctatgacggcatcccggcctacctctatggcccg
tccccggtcagcatgggccggcgcgacgagcacgtgacggtggaggaattcctccacatc
gtcaccacccacgtgctgtcggccttcgactatctgcgcaagtag
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