Sturnus vulgaris (common starling): 106855418
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Entry
106855418 CDS
T08833
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
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Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
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]
106855418 (RC3H2)
04121 Ubiquitin system [BR:
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106855418 (RC3H2)
Transcription factors [BR:
svg03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106855418 (RC3H2)
Ubiquitin system [BR:
svg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106855418 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
106855418
NCBI-ProteinID:
XP_014735562
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISSTVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALENTKKGGKTGANGQNASGSPTE
PLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSAHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacg
tgcctgaacaagctccatcgcaaggcctgtccctttgaccagactgccatcaacacggac
atcgatgtgcttcctgtgaactttgcactcctccagctggttggagcacaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcgctgggagag
agaacggtcacagagctcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtgttactggcactggaagatgggtctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagttccggagttacgaggctttgcggagagagcac
gatgcccaaatcgttcacattgccatggaagcaggacttcgaatatcaccagagcagtgg
tcttcccttctttatggagacctggcacataaatcacacatgcaatccattattgacaag
cttcaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggagatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagctcaacagtgagaacattccctcttcta
aataaagttggcgtaaacagcaccgtctcaaccacaacgggaaacgtgatctctgtcata
ggaagccctgaggcaacgggcaagatggtgccaagtactaatggaatagctaatctagaa
actggggttccccagctgatcccccgctgtgcagacacctccctgagagctctggagaac
accaagaagggagggaagactggagccaatggccagaacgcttctggctcccccacagaa
ccacttcctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccgcattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacagggtattatcca
gcacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagagtcctccctcccacctgcttccgtgccatatgccgatcattacagcacg
tttccccctcgggatcgcctgaactctccctaccagcctcctcctccgcagccctacgga
ccagtccctcctgtcccctctggaatgtacgctccggtttatgacagcaggcgcatctgg
cgcccccagatgtacccccgagatgatatcatcaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacgtcattacgggagaggtacaactcactggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgagacggaagccagagcaatgg
gcacagtaccacacacagaaaactcctctggtgtcgtcaacccttcctatggcaacgcca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggatgtcaaaaggagagtgcat
ttgtttgaaacgcagagaagggcaaaggaggaagatcctataatcccgttcagcgatgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcactggttaccacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgtagactcaagatggagtgcctatggctcagattctgcc
tcctcagcacgttatgcagaacgggacagattcatagttacagatttgtctgctcacaga
aagcattccagcactggagatctgctgagtattgaattacagcaggccaaaagcaactcc
ttactccttcagagagaggcaaatgcacttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttactttaaaccttttaagcaaggaaattgatttgaggaatggtgag
actgattatcctgaagactgtgcagacacaaagccagaccgagacattgaattggagctg
tcagccctcgatacagacgaacctgatgggcaaggtgaacagatagaagagattctggac
atacagctagggattagctcccaagaggatcaactgctcaatggaacaactgtagagaat
gggcatctgctaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
