Sturnus vulgaris (common starling): 106856751
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Entry
106856751 CDS
T08833
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
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]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
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]
106856751 (JMJD1C)
Chromosome and associated proteins [BR:
svg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
106856751 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
CUB
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
106856751
NCBI-ProteinID:
XP_014737803
LinkDB
All DBs
Position
Unknown
AA seq
2521 aa
AA seq
DB search
MAVETRPELVGKRFLCLGGEEPPESGRWRAGVIRAVSQRDSLSPDLAVYVEFDDLEWEKR
EWVKVYEDFATFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYSSITAVE
FLVDKRLDFINEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYSL
NGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHS
LLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPRQNLHQQQRNTRP
NKRKGSDSSMPDEEKMKDERYDYIGRGENPKTKNKHFLNKRRKPEEDEKKLNMKRLRTDN
ISDYSESSDSEISNKRLTDSSSEQNSENELKSKNSSEINGEGKSQTTEGVEQTLTDRQSP
WDELHHDKNHEETERLKASVLDHQEKSSLHAVEQPTLYEQNAKDPPVQECNAEKHHTVEL
KNEQFLTRPPTPKCVVDVTNKTNSEKENQDNAASTFGLQTVQKIESHSSDLKQQFANADF
LEARKQEADQSWVSSVGKTDLIQLGVVKSLPVHEHLNSEKVQYGSFMSSLNVASLAEESK
LHKQSPVPDSVKSKSSASVDHPKTKSPDAKPKFTQSSDTVKSKVSSQNSHAIGLTRSTNK
TDHDLSRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTNHIPPYLHQH
NYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSASHHSVHHPHLL
SAVLPGVPAASLLGAHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYNQ
LGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPWLHQPTPVTSADS
LGLRSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHRKEELERKAFVEPLRSVTTVPVK
SELEQSRAQTAKESHMHRHYADPILNQLPRPPQETGERLGKYKEEHRRILQESIEVAPFT
AKIKALEGERENYSRVASLSSSPKSHSVKYDKDAERSVSELYKIKHSVPQSLPQSNYFTT
LSNSVVNEPPRSYPSKEASGVYVDKQTNCPSTAASPQAIPSYISSLSKPPPLIKHQPESE
GSTSKIPEQLSQSVQSHSVNSFRSDSRSPTQLSVSSSNTLRSMPALHRAPVFHPPVHQNL
EKKDSSYSSLSPPTLTPVQPVNAGGSKIQELQKPPTLVPEPKEAQTGFKGTSEQNLSEMW
KSNNAPNNEKVDWHSGRMSGKLQSATASVIVRPPSSIKYENVPVMQSASKERVSERSSAV
ANLADCLKMAEARESGRIILPNMNSDSSRTQYEKRFATVLQGSTPRAVTPTTTIICSTKT
DVTASAAMMTSISSQGSSEVTYSVSSAVSCTLLECTASRAASQVVVQPQECKVSTPALVT
SAAGSAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTTETESNSVKNQTFSASLSLDT
AIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIK
PCTVNLIASTSNDLQNSIDSKILADKFVKEDKYPRRKGKRTYDSGSESGDSDESESKSEQ
RTKRQPKPTYKKKQNDLQKKKGDAEEEVRPNGVLSRSTKEKSKLKLQSGSNSTGIPRSVL
KDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRR
LSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQLVTS
EKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKS
SRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCTTKQ
NTQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNGNTSPRSDVSTDSK
LTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEGKDQDNLESPNCKSSPPASQN
SEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTTSGKSGRTMPNILDDIIASVVEN
KIPPNRAPKINVKSEIKDEPKDDKKCIQDDCSKRYSDIQYSWICDKHVLWLRDHKNSNNW
KLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEFW
DGFEDVSKRQKVKNGETALLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCSPEGKLNL
ASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHVEVSDVVNILVYVGIAKGNGVLS
KSGVLKKLEEEDLDDLLRKRLKDSSELPGALWHIYAGKDSDKIREFLQKIAKEQGLEVLP
EQDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTE
DFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHESEMEDTDE
S
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcgattcctgtgcctcggcggcgag
gaaccgccggagagcgggcgctggcgggctggggttatccgtgccgtgtcccagcgggac
tcgctcagccccgacctggcggtatatgtggaatttgatgaccttgaatgggaaaagcga
gaatgggttaaagtttatgaagattttgcaaccttcttggtggagtaccagctagtctgg
gcgaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaattcaatggcct
gcactgacgttcaaacccttggttggaaaaagtgtatacagttcaattactgcagtagaa
tttcttgtggataaacggctggatttcataaatgaagatagtgcctttcagccctatcag
gacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggaggta
aaagcctgggtaaaggagcaaaaggttcaggagatttttatgcaaggtccgtactcctta
aatggttatagggtgagagtgtacagacaggattctgccacccagtggttcactggcatc
atcactcaccatgatctcttcacccgcactatggtggttatgaatgaccaggtgttagaa
cctcagaatgttgatccttctatggttcagatgacctttctagatgatgttgttcactct
ttgttgaaaggtgaaaatattggcatcacttcacgccgacggtctcgttccaaccagaac
agcaacacagttcatggtcattatacgcgtgcacaggcaaatagtcccagaccagcaatg
aattcccaaactgcagcaccaagacagaatttgcaccagcaacagaggaatactcggcca
aataagaggaaaggctctgatagcagtatgcctgatgaagagaagatgaaagatgaaaga
tatgattatataggtcgaggagaaaaccccaaaaccaaaaataaacacttccttaataaa
agaagaaaacctgaagaggatgaaaaaaaattgaatatgaagagactgcggacagacaat
atctcagattattctgagagcagcgactcggagatttcaaataaaagattaacagattca
tcttcggagcaaaattcagaaaatgagttaaaaagcaagaactcttcagagataaatgga
gaaggaaaatcccaaactactgagggagtagaacagacactaacagatagacagtctcca
tgggatgaattgcatcatgataaaaaccatgaagagacagaaagactgaaggcatcagtc
ttggatcatcaggaaaaatcttcactccatgcagtggagcagccaacactttatgaacag
aatgccaaggatccacctgttcaagagtgtaatgcagaaaaacatcatactgtggagtta
aaaaatgagcagtttttaaccagacctcctactcctaagtgtgttgttgatgttactaat
aaaaccaactctgaaaaggaaaatcaggataatgctgcaagtacctttggtttgcaaaca
gttcagaaaatagaatctcacagcagtgatttaaagcagcaatttgcaaatgcagatttc
cttgaagcaagaaaacaggaagctgatcaaagttgggttagcagtgttggtaaaacagat
ttgatacaacttggggttgtaaaatctttaccagtacatgaacacttaaactctgaaaaa
gtgcagtatggctcatttatgtcttcgttaaatgtagcttctctagcagaagaaagtaaa
ctgcataaacaaagtccagtccctgattctgtgaagtcaaaatctagtgcttcagttgat
catcctaaaacaaagtcacctgatgctaagcctaaattcacccagtcttctgatactgtg
aagtcaaaggttagttcccaaaacagccatgctattggattaacaaggtcaaccaataaa
actgatcatgatttgtccaggtctagttttcatccagttccagctagagttagtgctcta
gaagccactaagagtcctcttatcattgacaagaatgaacatttcacagtatacagggac
cccactctgattggacaagaaacaggaactaatcacattccaccttacttgcatcagcat
aattatcctctgcattcctcatcccaccgaacctgtttaaatccaaatgcacatcatcct
gcattaactggttcatcccatctgcttgctgggtcttcagctcaggctcctttgtccgct
attaacactcacccccttagtagtgcatctcaccattctgttcatcaccctcatctactt
tctgcagtgttgcccggagtgcctgctgcctccttgctgggtgcccacccgcgactagag
actgctcatgctagcagcctaagccatttggcattagcacaccagcagcagcaacagatg
ttacaacaccagtctccacatcttctcggacaagctcatccttctgcttcctataatcag
ctagggctttatccaattatttggcagtatccaaatggaacacatgcttactcaggactt
ggtctgccctcctccaaatgggtccacccagaaactcctgttaatgcggaggcttccttg
agaaggaatacccccagcccctggttacaccagcccaccccagtgacctcagctgacagc
cttggtttacggagtcacattcctgtgcgaccatccagcgcagatccccttcggcctctc
aaattgacaacgcattccagcccacctttgtccaaaagcattgtagagcatcgcaaagaa
gaactggagaggaaagcttttgttgaacctctgcgttctgttaccactgtgccagtgaag
agtgagctggagcagagcagagcgcagacagcaaaggagagccatatgcacagacattat
gcagatccaatattgaaccagctgccaaggccaccacaggagactggggagcgactgggc
aaatacaaagaagaacacagacgaatacttcaagaaagtattgaagttgctccatttaca
gctaaaataaaggcactggagggagagagagagaactactccagggtagcatccttatct
tcaagtcccaaaagccattcagtgaaatatgacaaagatgctgaacgctctgtgtcagaa
ctgtataaaattaagcattcagttccacagagtttgccacagagtaattatttcactacc
ttgtctaacagtgtagtaaatgaaccaccaagatcatacccatcaaaggaagcttcaggt
gtatatgttgataagcaaactaattgtccttcaactgcagctagtccccaggctatcccc
tcctacatttcttccctttcaaaaccaccacctttaattaagcaccaaccagagagtgaa
ggctctacaagcaagattcccgagcagctttcacagtcggtgcagtctcactctgtaaat
tctttcaggagtgacagcaggagccctactcagttgtcagtctcatcttcaaatacactc
cggagtatgcctgccttgcatagggcccctgtgtttcatcctcctgtgcaccagaacctg
gagaagaaggacagcagctatagcagcctttcacctccaactctaactcctgttcaacct
gttaatgctggtggcagcaaaatacaggagttgcagaaaccgccaactttagtgcctgag
cccaaggaagcccaaactggtttcaagggcacttctgaacagaatttatcagaaatgtgg
aagtctaataatgccccaaataacgaaaaagtggattggcacagtggaagaatgagtgga
aagttgcagtccgctacagcatctgttattgtgcgtcctccttctagcataaaatatgag
aatgtaccagtaatgcagtctgcttcgaaagaacgagttagcgagagatcttcagctgtg
gcaaatctagcagattgcctgaaaatggcggaagccagggagtctggaagaatcatactg
ccaaatatgaactcagacagttctcgcacacagtatgaaaagagatttgcaactgtcttg
caaggcagcactccacgtgctgtcacccctactacaactatcatctgtagcaccaaaacg
gatgtcactgcatcagcagcaatgatgaccagcatatcaagccaggggagctctgaagtg
acttactcggtctcgagtgcagtgtcctgcacactgctggagtgcacggcctcaagagcg
gccagccaggtggtggtgcagcctcaggagtgcaaggtcagcactccagctctggttaca
tctgctgctggcagtgctgctcagcccagctcgggattctccacctctactgactttgtc
catttgaaaaagcacaaggcagcgctggctgcagctcagtttaaaagtagtaacaccact
gagacagagtccaactctgtgaaaaatcagacattttcagcatctctctccctagacact
gcaatcgtctgtaatacaataaacaaagcgaactctgtaggcagtgggcaaacttcccag
acaagtcagccaaactaccacactaaactaaaaaaggcttggcttacaaggcattcagag
gaagataaaaacactaataaaaaagagaattcagggaacagtgtttcagaaattattaag
ccgtgtactgtcaatttaatagcatctacatcaaatgatttgcaaaatagcatagatagc
aaaatcttggcagataagtttgtaaaggaagataagtacccaaggagaaaaggaaaacga
acttacgactctggctctgaaagtggtgattctgatgaaagtgagagcaagtcagagcaa
aggactaaacggcagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaaaaa
aagggtgatgctgaggaagaagtgagaccaaatggtgttcttagcaggagcaccaaagaa
aaaagcaagctgaagttacagagcggcagtaacagcactggtatacctcgctcagtgtta
aaagattggcgcaaagtaaagaagctgaagcaaacgggagagtcctttttgcaggatgat
tcttgttctgaaataggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagc
aagaaaggagaagaaccaactcattcaccagtattttgtaggttttactactttcggcgg
ttgtcttttagtaagaacggagtggttaggatagatggtttctcctctcctgatcagtat
gatgatgaagcactgagtttatggacacatgaaaactatgaagatgatgaactggacctt
gaaacttctaaatacattctagatatcataggggataaattttgtcagttggtaacatct
gagaaaacagccatgtcctgggtgaaaaaagacgccaaaattgcatggaagagagcagtg
agaggagtccgtgagatgtgtgatgcatgtgaagccacattatttaacattcattgggtc
tgccaaaaatgtggatttgtggtctgcctagattgttacaaagcaaaggaaaggaaaagt
tctagagataaggagttgtacgcctggatgaagtgtgtgaagggacagcctcatgatcac
aagcacctgatgccaacacagattattccaggctctgttttgacagatcttttagacgct
atgcacaatattagagaaaaatttgaaattaaatcccattgtcagtgtaccaccaagcag
aacacacaagctggcaagctccctgcaatgaatggtgtgtctcaggttttgcagaatgtc
cttaaccacagtaataaaatttctctgtgtatgcctgagtctcaacagcagaatactcct
caaaagtctgagacaaatggtaacacaagtcccagaagtgatgtgagcacagacagcaaa
ttaacaccgcctgaatcacagtctccactgcattggttggctgatcttgcagagcaaaaa
gccagagaagagaaaaaagagaacaaagaatgtccttctggaaaacattcaaaggaaggg
aaggaccaggataatttggagtccccaaactgtaaaagttcccctcctgcatcccagaac
agcgagcagggctcaaccttacgagatctgttaactacaacagcaggcaaactgcgtctg
ggttctacagatgctggcattgcttttgctccggtttactctacaggaacaacaagtggc
aagagtggaaggactatgccaaacattcttgatgacataattgcttcagtagtagaaaac
aagattccaccaaatagagcgccaaagataaatgtaaaatctgaaataaaagatgagcca
aaggatgataagaaatgtattcaggatgactgcagtaaacggtacagtgatatccagtat
tcatggatctgtgataagcatgttctgtggctcagagaccataaaaacagcaataactgg
aagctcttcaaagagtgctggaaacaaggaagacctgttttggtgtctggtatgcataag
aaaatgaacttcagcctgtggaaagctgagtcaatcagtctggattttggaaaccagcaa
gctgatatcttgaattgcaaagacagtattatttccaacaccaatgtcaaggagttctgg
gatggttttgaagatgtttcaaaacggcagaaagtaaaaaatggagaaacagctctacta
aaactgaaagactggccttctggtgaagatttcaagaccatgatgccagcaagatatgag
gacttattaaaaagtttacccttacctgaatattgtagtccagaaggaaaactaaacttg
gcttctcatctaccaggattttttgtccgccccgatttgggacccagactatgcagtgca
tatggtgtggctgctacgaaagaccatgacataggaactacaaatctccatgttgaagtt
tctgatgttgtgaacatccttgtttatgttggcatagccaaaggaaatggagtactttcc
aagtcaggagttttgaagaagttggaagaggaagacttggatgaccttttaaggaagcgg
ttgaaagattcaagtgaattacctggtgctttatggcacatttatgctggcaaagattct
gacaagataagagagtttctgcaaaagatagcaaaggagcaaggcctagaagttttacca
gagcaggatccaatccgtgatcagagttggtatgtgaacaaaaaacttcgccaaagactt
cttgaagaatatggagtaaaaacctgcacagttattcagttccttggtgatgctattatt
ctaccagcaggagcacttcatcaggtgcaaaattttcacagctgtgttcaagtaacggaa
gactttgtgtctccagaacatcttgtacagtcatttcacttaacgcaggagctgaggctg
tcaaaggaagaaatcaattatgatgataaactgcaggttaaaaatattttgtatcatgca
gttaaagaaatggtgagagctttgaagattcacgaaagtgaaatggaagatacagatgag
agctga
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integrated database retrieval system
