Sturnus vulgaris (common starling): 106859189
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Entry
106859189 CDS
T08833
Symbol
SAMHD1
Name
(RefSeq) LOW QUALITY PROTEIN: deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
svg
Sturnus vulgaris (common starling)
Pathway
svg03250
Viral life cycle - HIV-1
svg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106859189 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106859189 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svg03400
]
106859189 (SAMHD1)
DNA repair and recombination proteins [BR:
svg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106859189 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HARE-HTH
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
106859189
NCBI-ProteinID:
XP_014741751
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MQMGVGMGGCLXKRIKSWCDTAGQGRSAALWTSCPAERLEVLACLRQLQEQHMEVMKVFN
DPIHGHIEFHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLV
RTLKERQPDLNITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLEWKHETASVQ
MFEHLIASNKLEEVMKSYGLVLEEDMLFIKEQIGGPVDETACVKSWPYRGRPKEKSFLYE
IVANKKNGIDVDKWDYFARDCHHLGISNNFDYKRLLIFTRVCEVENQKHICTRDKEVGNL
YEMFHTRNCLHRRAYQHKTGNIIEIMITEAFQKADRFLKISGSGKKEYRISTAMEDMEAY
AKLTDCIYLEILHSSSPDLEEAREILRKIERRELYKFLGETRPESKKEIVKSNILAESIA
NSKPKKNPPDVELKAENFIVDVIRMDYGMKEQNPIDKVHFYCKADPLKAVKITKEQVSNF
LPIIFMEQVVRVYYKSQDPHIISAAKQYFVQWCMQNDFTKPQDGDVVAPHLIPMKEAWNN
TT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgggagtgggaatgggcgggtgtctgnagaagagaataaagagctggtgtgac
acagcaggacaaggcagaagtgctgcactttggacaagctgcccagctgagcgactggaa
gtgctggcgtgcctgagacagctgcaagagcagcacatggaggtgatgaaggtttttaat
gatcctattcacggtcacattgaatttcatcccctgctggttcggatcattgacacccct
caattccagcgcctccggtacatcaagcagctgggtggcacgtactttgtttttccagga
gcctctcacaaccgctttgaacactccctcggggttggctaccttgcaggatgtctggtt
cgtacactgaaggagagacaaccagacctgaatataacccagcgagacatcctctgtgta
gaaattgctgggctttgtcacgatttgggtcatggaccattttcacatatgtttgatgga
agatttattccacttactcgtccagatttggagtggaagcatgaaactgcttctgttcaa
atgtttgagcacttgatcgcttccaataaactagaagaagtcatgaaatcgtatggtctt
gtcctggaagaagatatgttgttcatcaaggaacaaataggagggcctgtagatgaaact
gcctgtgtgaaatcgtggccctaccgtggtcgaccaaaggagaaaagtttcctctatgag
attgtagctaataaaaaaaatggcattgatgttgacaagtgggattattttgcaagggat
tgccatcacctgggcatctcgaataattttgactataagcgattgcttatcttcactcgg
gtctgtgaagtggaaaaccagaagcatatctgtacccgtgacaaggaagttggaaatttg
tatgagatgttccacacccggaactgtctgcaccggagagcataccagcataagactggc
aacatcattgaaataatgataacagaagcctttcaaaaagcagacagatttttaaaaata
agcggctctggaaaaaaagagtatcggatttctacagcaatggaagacatggaagcctac
gctaaactaactgactgtatctacctggaaattctgcactcaagttctccagacctggag
gaggcacgagaaattttgcgtaaaatagaacgacgtgaattatacaaatttttaggagag
actcgacctgaatcaaagaaggaaattgtaaagagtaatatcctggcagaaagcattgca
aattccaagccaaagaagaaccctccagacgtggagctaaaggctgagaacttcatagtt
gatgttatcagaatggattatggaatgaaggaacagaatccaattgataaggttcacttc
tattgcaaggctgatcctctcaaggcagtcaaaatcactaaagagcaggtttcaaacttt
ttacccataatatttatggagcaggttgtccgggtttattacaaaagtcaggatccacat
attatttcagctgcaaaacagtactttgttcagtggtgtatgcagaatgatttcaccaaa
ccacaggatggtgatgttgttgctcctcatctaattccaatgaaggaagcctggaataac
acgacatga
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