Subdoligranulum variabile: NQ490_01555
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Entry
NQ490_01555 CDS
T08454
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
svj
Subdoligranulum variabile
Pathway
svj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ490_01555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svj02000
]
NQ490_01555
Transporters [BR:
svj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ490_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
T2SSE
AAA_29
Zeta_toxin
AAA_30
ATP-synt_ab
AAA_19
AAA_21
ABC_ATPase
SRP54
AAA_22
DO-GTPase2
AAA_28
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UWP68562
LinkDB
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Position
322567..324306
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AA seq
579 aa
AA seq
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MHKLLRYIKGYEKQALLAPLFKMLEACFELFVPLVVASIIDTGIKNADAVFIWQRCGLLV
LLAVIGLTCSLTAQYFSAKAALGFGTALRKDLFRHIDTLSYSELDGIGTPTLVTRMTSDI
NQVQSGVNLTLRLLLRCPFIVIGALIMAASISPRLTLLFVATTLVISLIIWLIMRATVPI
YHEAQNGLDRVTLLTRENYVGARVVRAFARQADELAAFVETNDHLKTIQLKAGRISALMN
PLTYLVVNLTVIALLLLGGREVNVGNLTQGEVIALINYMSQILINLLRVADLVISVTRAL
ASGMRVNEILNTQTTMSDPSSPELTPDANAPAVDFDHVTFTYRGAGAPSLTDVSFAAQSG
QTIGVIGGTGSGKTTLIDLVARFYDVSEGAVRLFGHDVKEYAFAQLRQLIGVVPQQAMLF
TGTIRDNMRWAAPNATDEEIWAALEIAQAADFVRGKPGMLDEPVETAGRNFSGGQRQRLT
IARALVPRPKILILDDSASALDFATDAALRKALKEKTQGMTVFIVSQRAASVQRADHILV
LDDGVLTGDAPHADLLKTCPVYREICLSQLSKEEVEKTL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagttgttgcgctacatcaagggctatgaaaagcaggccctgctggcgccgctc
ttcaaaatgctggaggcctgttttgaactgtttgttcccctggtcgtggccagcatcatc
gataccggcatcaaaaacgccgacgccgtctttatctggcagcgttgtggcctgctggtc
ctgctcgccgtcatcggcctgacctgcagcttgaccgcccagtatttttccgccaaggct
gccctgggctttggtacagctctgcgcaaggatctgttccggcacattgataccctgagc
tacagcgagctggacggcatcggtaccccgacgctggtcacccggatgaccagcgacatc
aaccaggtacaaagcggtgtcaacctcacactgcggctgctgctacgctgccctttcatt
gtaattggcgcgctgatcatggcagcctccatcagtccccgtctgacgctgctctttgtg
gcaaccacccttgtcatctcgctgatcatctggctgatcatgcgtgcaacggtccccatt
taccatgaagcgcagaacggtctggaccgcgtcacactgctgacccgtgagaattatgta
ggggcccgtgtagtgagagcctttgcccgtcaggccgatgagctggccgcctttgtggaa
accaatgaccatctgaaaaccattcagcttaaagccggccgtatctccgctctgatgaac
ccgctgacctatctggtggtcaacctcacggtcattgctctgttgctgctgggcggtcgg
gaagtcaatgtgggcaacctcacccagggcgaagtgatcgcgctcatcaattatatgagc
cagatcctgatcaacctgctgcgggtagcggatctggtcatctcggtgacccgtgccctg
gcaagcggtatgcgcgtcaacgagatcctcaacacccaaaccaccatgtcggatccctct
tccccggaactgacgcctgatgcaaacgcgcctgccgtggactttgatcacgtcaccttt
acctatcgcggcgccggcgcccccagtctgaccgatgtgagttttgccgctcagtccggc
cagaccatcggcgtcatcggcggcaccggcagcggcaagacgaccctcatcgatctggtg
gcccgcttctacgacgtcagcgaaggagccgtgcgtctctttggccatgatgtaaaagag
tacgcttttgcgcagctgcggcagctgatcggcgttgtaccccagcaggcaatgttattc
accggtaccattcgcgacaatatgcggtgggcggcgcccaatgccaccgacgaggagatc
tgggccgcgctggagattgcccaggccgccgactttgtccgcgggaaacccggcatgctg
gatgagcccgtggagaccgccggccgcaacttttccggcgggcagcggcagcgcctgacc
atcgcccgcgcgctggtcccccgtcccaaaatcctgattctcgatgacagcgcttcggcc
ctggactttgccaccgacgctgcgctgcgcaaagccctgaaagaaaagacgcagggcatg
accgtctttatcgtctcccagcgagccgccagcgtgcagcgtgccgatcatatcctggtg
ctggacgacggcgttctgactggcgatgcaccgcacgctgatctgctgaaaacctgcccg
gtctaccgggagatttgtctgagtcagctgagcaaggaggaggtggaaaaaacgttatga
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