Streptomyces violaceusniger: Strvi_1110
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Entry
Strvi_1110 CDS
T01602
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Strvi_1110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_1110
Enzymes [BR:
svl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Strvi_1110
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Strvi_1110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEM80870
UniProt:
G2P0B2
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All DBs
Position
935809..936657
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AA seq
282 aa
AA seq
DB search
MQWMGAWFLSRIVPEVLTVTTVNVNGLRAAAKKGFGPWLDATAADVVCLQEVRAEPKELP
EAVREPDGWHVVHAPAAAKGRAGVSVYARRELEGVRVGFGSSEFDGSGRYVEVDLPGVTV
GSLYLPSGEVGTDRQDEKERFMAEFLPYLKELRERAAAGGREALVAGDWNIAHQEADLKN
WKANQKKSGFLPEERAWLTSVFEEAGYVDVVRALHPDVAGPYSWWSYRGRAFDNDAGWRI
DYQIATPGLAGRAVKAVVERAPAYDQRWSDHAPVTVAYGSAH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggatgggcgcgtggtttttgtcgcgtatcgtgccggaggtgctcaccgtgacg
accgtgaatgtaaacgggctgcgcgccgccgccaagaagggcttcggcccttggctggac
gctaccgcggccgatgtggtgtgcctccaggaggtacgcgccgaacccaaggagctgccg
gaggcggtccgcgaacccgacggctggcatgtggtgcacgcccccgcggcggccaagggc
cgggccggggtgtcggtgtacgcccggcgcgagctggagggcgtacgggtcggcttcggg
tcgtccgagttcgacggcagcggccgttatgtggaggtcgatctgcccggcgtgaccgtc
ggcagtctgtatctcccctcgggtgaggtcggcacggaccgccaggacgagaaggagcgc
ttcatggcggagttccttccgtatctgaaggagctgcgcgaacgggcggcggccggcggg
cgcgaggcgctggtggccggcgactggaacatcgcccaccaggaggccgacctcaagaac
tggaaggccaaccagaagaagtccgggttcctgccggaggagcgcgcctggctgaccagc
gtcttcgaggaggcggggtacgtggacgtggtgcgcgccctgcatcccgacgtcgccggt
ccgtactcgtggtggtcctaccgcggccgggccttcgacaacgacgcgggctggcgcatc
gactaccagatcgcgacccctgggctcgccgggcgtgcggtcaaggcggtcgtggaacgg
gcgcccgcctacgaccagcggtggagcgaccacgccccggtgacggtggcctacggctcg
gctcactga
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