Shewanella vesiculosa: KDH10_000107
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Entry
KDH10_000107 CDS
T08322
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00521
Streptomycin biosynthesis
svm00523
Polyketide sugar unit biosynthesis
svm00541
O-Antigen nucleotide sugar biosynthesis
svm01100
Metabolic pathways
svm01110
Biosynthesis of secondary metabolites
svm01250
Biosynthesis of nucleotide sugars
Module
svm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KDH10_000107 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KDH10_000107 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KDH10_000107 (rfbC)
Enzymes [BR:
svm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KDH10_000107 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UJL42937
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All DBs
Position
119677..120225
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AA seq
182 aa
AA seq
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MKVIATKIPDVKIIEPSVFGDDRGFFMETWSQQQFEALVTGKPTIFVQDNHSKSNKGILR
GLHYQTKHTQGKLVRVVSGEVFDVSVDIRKGSPTFGQWIGVYLSADNKRQLWIPEGFAHG
FYVTSDQAEFIYKCTDYYCPESEVSIAWNDPAIGINWPLDKPPLLSNRDAHQSILLKYAQ
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NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgctacaaaaattccagatgtgaagataatagagccaagcgtgtttggt
gatgatcgtggcttttttatggagacttggagtcagcaacagtttgaagcactcgtgaca
ggcaagcctaccatttttgttcaggataaccattcaaagtcaaacaagggaatattacgc
ggtttacattatcaaacaaaacatactcaaggaaagctggtacgtgtcgtgagcggtgaa
gtgtttgatgtgagtgtggatattcgtaaaggctcacctacctttggtcaatggatcggt
gtttatttgtctgccgacaacaaacgtcaattgtggatccctgaaggctttgcgcatggt
ttttatgtaacaagtgaccaggcggaatttatttacaaatgtactgattactattgccct
gaatctgaagtgagtattgcctggaatgatcccgctattggcattaattggccgttagat
aagccacctttattatcaaatagagatgcacatcaaagtatattgctcaagtacgcacag
tgtttataa
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