Shewanella vesiculosa: KDH10_000526
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Entry
KDH10_000526 CDS
T08322
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_000526 (rluC)
Enzymes [BR:
svm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
KDH10_000526 (rluC)
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDH10_000526 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UJL43259
LinkDB
All DBs
Position
608099..609055
Genome browser
AA seq
318 aa
AA seq
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MNTETTPQVEYVTIDEDHFEQRIDNFLLTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEYK
LQIGDIVRVPPVRVAEKDNRKAPSPNLSRVSQLEERIIHEDNHLIVLNKPAGIAVHGGSG
VDYGVIEGLRSLRPQQKFLELVHRLDKDTSGVLLVAKKRSALKHLHEQLRSKTMQKDYLA
LVRGEWQASDKVVKAPLLKITLKSGERIVRVNKEGKESETRYKIMQRYQGCTLVKASPVT
GRTHQIRVHCQYAGHAIACDDKYSEQQFDDSMRALGLDRLFLHAAELKFTHPENDQVMQV
KAPLDPVLLSTLEKLKRV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgaaaccaccccccaagttgaatacgtgactatcgacgaagatcattttgaa
caacgcatcgataattttttgctgactaaattaaaaggcgtaccgaaaagcatgatctat
cggattgtgcgtaaaggcgaagtgcgggtaaataaaaaacgcattaagccggaatataaa
ttacaaatcggagacattgttagggttccgcctgttcgtgttgccgaaaaagacaatcgc
aaggcaccatcacctaatttatcaagagtgtctcagcttgaagaacgtatcatccatgaa
gataatcatttaattgtgttaaacaagcctgccggtattgcagtacatggcggaagtggc
gtggattatggtgtgattgaaggcttacgctcattgcgtccacagcaaaagtttttagag
ttagtacatcgtttagataaagatacgtctggtgtgttgcttgtggctaaaaaacgcagt
gccttgaagcatctgcatgaacaattgcgcagtaaaaccatgcaaaaagattatttagcc
ttggtgcgtggcgaatggcaggcaagcgataaagtggttaaagcaccactgttaaaaatc
actttaaagtcgggcgaacgcattgtgcgagtcaataaagagggtaaagagtctgaaacc
cgctataagattatgcagcgttaccaaggttgtactttagttaaggctagtcctgttaca
ggacgaacccatcagatacgagtgcattgtcagtatgctggtcatgctattgcttgtgat
gataaatacagtgagcagcaatttgatgacagtatgcgggccttaggtttagaccgtttg
tttttgcatgccgcagaacttaaatttactcatcctgaaaatgatcaagttatgcaggtt
aaagcgcctttagacccagtgctactgagcacacttgagaagttgaaaagagtataa
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