Shewanella vesiculosa: KDH10_002106
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Entry
KDH10_002106 CDS
T08322
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_002106
Enzymes [BR:
svm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KDH10_002106
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KDH10_002106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PNPase
Motif
Other DBs
NCBI-ProteinID:
UJL41183
LinkDB
All DBs
Position
complement(2457404..2458117)
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AA seq
237 aa
AA seq
DB search
MVSKRGRLDQFIAGTLQIPKKAVRELLINNKVRVDGQFAKSLDLQIDEFTHIECNGVVLR
HYQKRYYMLNKPDGVVSATIDDKHPTALGLMTGINTEMLHIAGRLDLHSTGLLLLTNDAK
WSEALMAPDHKVDKKYLVTLANPLDQAYVEAFANGMYFEYENITTLPAQLMLLSSHQARV
VLREGKYHQIKRMFGRFRNPVVALHRESVGDIVLDHTLLAGEFRALTKAEVDSIFQH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctaaacgaggtcgactcgatcaatttattgctggcacgttacagatccctaaa
aaagccgtgcgtgaactattaatcaacaataaagtgcgtgttgatggccaatttgctaag
tcactagatttacaaattgatgagtttactcatattgagtgtaatggtgtggtgctacgt
cattatcaaaaacgctactatatgcttaataagcctgacggagtggtcagtgccactatt
gacgataagcatccgacggcattggggctaatgacgggcattaatactgagatgctgcat
atagctgggcgattagatttacattctactgggttattattgctcaccaatgacgctaaa
tggtcggaggctttgatggctccagatcataaagtcgacaaaaagtacttagtcacctta
gccaatccgctggatcaagcatatgttgaggcctttgcgaatgggatgtattttgagtat
gaaaatatcactacgttaccggcacaattgatgcttttatctagtcatcaagctcgggta
gtgttgcgtgaaggtaagtaccatcaaattaaacgtatgtttggtcgttttcgtaatccg
gtagttgcgctacatcgcgaatctgttggcgatattgtgctggatcacactttgttagct
ggcgagtttcgtgcattaacaaaagctgaagttgatagcatttttcagcactag
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